Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0282 ATGAGCACTGGCGACCTTCTCAGCATCGAACCTCTCGAACTTAAGTTCTTCTTTGAGCTCAAGAAGCAGATATCATGCTCTCTTATATTGTCAAATAAGACCGATAGCTATATAGCTTTCAAGGTGAAAACAACCAATCCCAAGAAGTATTGTGTTCGTCCAAACACCGGAGTAGTCATGCCACAATCTACATGTGATGTTATTGTTACCATGCAAGCGCAAAAGGATGCTCCGGCTGATATGCAATGCAAGGACAAGTTTCTTCTTCAAAGCGTAAAAGTAGATGATGGAACCACCGCAAAGGATATCACAGCAGAAATGTTCAACAAGGAAGCAGGGCACGTGGTTGAGGAATGTAAATTGAGAGTGGTGTATGTCTCTCCTACTCAACCTCCATCTCCAGTCCCAGAAGGTTCTGAGGAAGGGTCATCACCTCGAGGTTCTGTTTCTGACAATGGAAATGTTAGTGGTGTTGATTCTGCAGCGGTAGCAAGAGCATTTGTTGAACGGCATGAAGGTCCAGAAAAATCTGCAGAGGGAAAAGCTCTTATCTCAAGGCTAGTTGAAGAAAAGAATAATGCAATTCAACAAAATAACAAGCTTTGTCAGGAATTGGACCTACTGAGACGGGAAAGCAACAAAAGTCGTGGGGGGGTGTCGATGGCCATTGTCATACTAATTGTTTTACTTGGCATAATTATGGGGTATCTCATGAAGAAAACCTAA 726 0.4284 MSTGDLLSIEPLELKFFFELKKQISCSLILSNKTDSYIAFKVKTTNPKKYCVRPNTGVVMPQSTCDVIVTMQAQKDAPADMQCKDKFLLQSVKVDDGTTAKDITAEMFNKEAGHVVEECKLRVVYVSPTQPPSPVPEGSEEGSSPRGSVSDNGNVSGVDSAAVARAFVERHEGPEKSAEGKALISRLVEEKNNAIQQNNKLCQELDLLRRESNKSRGGVSMAIVILIVLLGIIMGYLMKKT* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0282 241 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 239 - -
Gso11g0282 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Gso11g0282 241 Coils Coil 184 211 - -
Gso11g0282 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Gso11g0282 241 MobiDBLite consensus disorder prediction 127 155 - -
Gso11g0282 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Gso11g0282 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Gso11g0282 241 Pfam MSP (Major sperm protein) domain 7 112 IPR000535 -
Gso11g0282 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 239 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0282 Gso-Chr11 2365404 2368700 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0282 - - gmx:100791280 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0282 11 2365404 2368700 Gso5g0500 5 5419190 5423699 PCT
Gso11g0282 11 2365404 2368700 Gso17g1191 17 11451020 11455456 PCT