Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0325 ATGACCGCCTCTCAACTCATCTCCGTTAGTCCCGACGAACTCCGCTTCCACTTTGAGTTGGAGAAGCAAACATTTTGCGATCTTAAGGTCCTCAATAACTCCGAGAACTATGTTGCTTTCAAGGTCAAAACCACTTCTCCAAAGAAATACTTTGTGCGACCTAACACCGCTGTTGTACAGCCCTGGGACTCTTGTATCATCAGAGTCACCCTCCAAGCCCAACGGGAATACCCTCCAGACATGCAATGTAAAGACAAGTTTCTCTTACAGAGTACAACAGTGAATCCAAATACTGATGTTGATGATCTCCCGCCAGATACTTTTAATAAGGAGAGTGGTAATTCAGTAGAGGAGTTGAAATTGAGAGTTGCATATATCTCTCCTACCTCACCTGAAGGAAGCTCTGAAGATGACGCATCAAAGAACTCGCAAAGCTTTGATACCTCTTCTAGTCAGGCTTTACAGAATCTGAAGGAAGAAAGAGATGCCGCTGCCAGACAAACGAGACAGCTGCAACAGGAACTGGACATGCTAAAAAACCGAAGAAACCGAAGAAGTGACCCTGGCTTTTCCTTAACCTTTGCCATTTTTGTGGGTCTCCTTGGAGCTTTACTTGGCTTTCTAATGAAACTTTTATTCTCTTCTCCATCTACAGAGTGA 660 0.4409 MTASQLISVSPDELRFHFELEKQTFCDLKVLNNSENYVAFKVKTTSPKKYFVRPNTAVVQPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTTVNPNTDVDDLPPDTFNKESGNSVEELKLRVAYISPTSPEGSSEDDASKNSQSFDTSSSQALQNLKEERDAAARQTRQLQQELDMLKNRRNRRSDPGFSLTFAIFVGLLGALLGFLMKLLFSSPSTE* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0325 219 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 3 216 IPR016763 GO:0005789
Gso11g0325 219 Gene3D Immunoglobulins 2 130 IPR013783 -
Gso11g0325 219 Coils Coil 154 181 - -
Gso11g0325 219 PIRSF VAMP_assoc_prot 133 211 IPR016763 GO:0005789
Gso11g0325 219 PIRSF VAMP_assoc_prot 1 161 IPR016763 GO:0005789
Gso11g0325 219 Pfam MSP (Major sperm protein) domain 7 104 IPR000535 -
Gso11g0325 219 PANTHER VESICLE-ASSOCIATED PROTEIN 2-1 3 216 - -
Gso11g0325 219 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Gso11g0325 219 MobiDBLite consensus disorder prediction 128 168 - -
Gso11g0325 219 SUPERFAMILY PapD-like 3 135 IPR008962 -
Gso11g0325 219 MobiDBLite consensus disorder prediction 128 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0325 Gso-Chr11 2733382 2737406 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0325 - - gmx:100794270 414.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1749 1 54306128 54310150 Gso11g0325 11 2733382 2737406 GST
Gso5g0500 5 5419190 5423699 Gso11g0325 11 2733382 2737406 PCT
Gso17g1191 17 11451020 11455456 Gso11g0325 11 2733382 2737406 PCT