Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0785 ATGGAACACAGCACATCCTTCAACGACTCAAATAACAGCCTCTCTTCACAACGAAGCCTCGTTTCAGTTCCTTCCCTCAACTCACACTCTCAATTCCTCACTCCTTCCACCACCTCCCACACGTGCCTCACCACTCTCAAATTCCTCACCTCATCCTCCGTATACATCTCCTCCCTCACCCTTGCCGGCAAGTTCCTCTACGCAGGCTCCTCCGACAGAGAAATCAGATCCTGGAACCACACCCATTTCATCCAAAACCAAAAACCAACCACCACCACCACCACCACCACCACCAACAACAACAACAACAGCGTTGTAATTGCCGGAAAAGGTGCTGTCAAGTCCATAGTAGTTCACTCCGACAAACTCTTCACCGCCCACCAAGACAACAAAATCCGCGTCTGGAAAGTCACAAACCTTTCCCACGACCACCAGAAGTACACACGTGTGGCCACACTCCCCACGCTCGCCGACCGCGTCACCAAACTCCTCGTCCCCAAAAACCACGTGCGGATTCGCCGCCACAAAAAGTGCACCTGGGTTCACCACGTCGACACCGTCTCCTCCATCGCCCTGTCCCAAGACGGAAACTTCTTGTACTCGGTCTCATGGGACAGAACAATTAAGGTTTGGCGAACCAAAGACTTGGCGTGCTTGGAGTCCGTGCGCAACGCGCACGACGACGCCATCAACGCGGTTGCAGTCTCCTACGATGGGCACGTCTACACAGGATCCGCGGACAAGAGAATCAGGGTTTGGAAAAAACTCGAAGGCGAGAAGAAACTTTCATTAGTGGATACTTTGGAGAAACATAATTCTGGGATTAACGCGTTGGCGCTTAAAAGTGATGGCTCTGTGTTGTATTCTGGTGCATGCGATAGGTCAATATTGGTTTCGGAGAAGGGAGAGAATGGTAAATTGTTAGTGGTTGGAGCTCTTAGGGGGCATGCTAAGTCGATTTTGTGCTTGGCGGTGGTTTCGGATTTGGTGTGTAGTGGTTCGGAGGACAAAACGGTGCGTATTTGGAGAGGGGTTCAGAAGGATGAGTATTCGTGTTTAGCTGTTTTAGAAGGGCATAGGAGTCCGATTAAGAGCATAACTGCAGCGCTTGATCTTAGTCAAGACCCTTCTTCCCAAGCCACGTCTTTTCTTCTCTACAGTGCCAGTTTGGACTCACATGTTAAGCTTTGGCAGCTTTTTCTTCCTCTTCTTTCAACTTAA 1221 0.502 MEHSTSFNDSNNSLSSQRSLVSVPSLNSHSQFLTPSTTSHTCLTTLKFLTSSSVYISSLTLAGKFLYAGSSDREIRSWNHTHFIQNQKPTTTTTTTTTNNNNNSVVIAGKGAVKSIVVHSDKLFTAHQDNKIRVWKVTNLSHDHQKYTRVATLPTLADRVTKLLVPKNHVRIRRHKKCTWVHHVDTVSSIALSQDGNFLYSVSWDRTIKVWRTKDLACLESVRNAHDDAINAVAVSYDGHVYTGSADKRIRVWKKLEGEKKLSLVDTLEKHNSGINALALKSDGSVLYSGACDRSILVSEKGENGKLLVVGALRGHAKSILCLAVVSDLVCSGSEDKTVRIWRGVQKDEYSCLAVLEGHRSPIKSITAALDLSQDPSSQATSFLLYSASLDSHVKLWQLFLPLLST* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0785 406 PANTHER MYOSIN HEAVY CHAIN KINASE B-LIKE PROTEIN 1 406 - -
Gso17g0785 406 Gene3D - 14 168 IPR015943 GO:0005515
Gso17g0785 406 PRINTS G protein beta WD-40 repeat signature 199 213 IPR020472 -
Gso17g0785 406 PRINTS G protein beta WD-40 repeat signature 330 344 IPR020472 -
Gso17g0785 406 PRINTS G protein beta WD-40 repeat signature 385 399 IPR020472 -
Gso17g0785 406 Gene3D - 169 258 IPR015943 GO:0005515
Gso17g0785 406 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 1 406 IPR045182 -
Gso17g0785 406 Pfam WD domain, G-beta repeat 220 254 IPR001680 GO:0005515
Gso17g0785 406 Pfam WD domain, G-beta repeat 181 211 IPR001680 GO:0005515
Gso17g0785 406 Pfam WD domain, G-beta repeat 311 342 IPR001680 GO:0005515
Gso17g0785 406 Pfam WD domain, G-beta repeat 351 397 IPR001680 GO:0005515
Gso17g0785 406 Pfam WD domain, G-beta repeat 264 297 IPR001680 GO:0005515
Gso17g0785 406 ProSiteProfiles Trp-Asp (WD) repeats profile. 313 342 IPR001680 GO:0005515
Gso17g0785 406 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 223 254 - -
Gso17g0785 406 ProSiteProfiles Trp-Asp (WD) repeats profile. 180 221 IPR001680 GO:0005515
Gso17g0785 406 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 313 342 - -
Gso17g0785 406 Gene3D - 259 402 IPR015943 GO:0005515
Gso17g0785 406 ProSiteProfiles Trp-Asp (WD) repeats profile. 223 254 IPR001680 GO:0005515
Gso17g0785 406 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 180 211 - -
Gso17g0785 406 SUPERFAMILY WD40 repeat-like 51 399 IPR036322 GO:0005515
Gso17g0785 406 SMART WD40_4 349 398 IPR001680 GO:0005515
Gso17g0785 406 SMART WD40_4 261 300 IPR001680 GO:0005515
Gso17g0785 406 SMART WD40_4 39 79 IPR001680 GO:0005515
Gso17g0785 406 SMART WD40_4 306 343 IPR001680 GO:0005515
Gso17g0785 406 SMART WD40_4 99 136 IPR001680 GO:0005515
Gso17g0785 406 SMART WD40_4 173 212 IPR001680 GO:0005515
Gso17g0785 406 SMART WD40_4 215 254 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0785 Gso-Chr17 7306647 7308321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0785 225 398 Acyl Lipid Metabolism Gene Families AT3G18860 28.022 9.21e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0785 - - gmx:100794737 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0280 5 2924875 2929510 Gso17g0785 17 7306647 7308321 GST
Gso17g0785 17 7306647 7308321 Gso4g1499 4 43795638 43797083 PCT
Gso17g0785 17 7306647 7308321 Gso6g1567 6 16187693 16189150 PCT
Gso4g1499 4 43795638 43797083 Gso17g0785 17 7306647 7308321 PCT
Gso6g1567 6 16187693 16189150 Gso17g0785 17 7306647 7308321 PCT