Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0329 ATGGTGTTGCAGAAGAGGTTAGACTATAGCTTTTATGGCTATCATGTGCCAACCAAGCGCCGAGCTACTCGATCAGCTAAGAGGAGGGCTACATTTCAAAGAAGGTTGGAAGACAATCAAATGTGTGCATTTGACTTATTGGCCACCATAGCTGACAATTTGTTGCAAGAGAAACAGAATCCAACCATATCCAGTGATAGATCATCGGAAAAGGATAGGGATGGATTTTCTAAAGTGGAATGCCAGGATGCAAATAAACCATTCAAAACTGAGCTTTCTGATGAAGCAAGTTGTGACAGAAAATGTCAGCATGAATTTGTTAGAGAAGGATGCCCAGATGCAAATAAACCATTCAAAGCTGAGCTTTCAGATGAAGGAAGTAGTGACAGAAAGTGTTTCTCTAATATTTCTTCACAATTATACAATCAAAATTGCTGTTTGAAGGAACTCCTGCAACATGAAATTGATGGTCATTCATGCATTGCTTCTATAGTAACAAGTTCCAGTTGCTCAGAGAAGATTGTTGCTGAGAGACTGGTGGATGGAAAAGGCCACAATGGAGTGGAAAATTTAGCGAGCAAAGTTGAATTAGGTTCCTCTGGATGTCTAGAGAGTAGTGGTTGCAAGTTAGATGGTGATGTTAGTAAAGTAAAAGATGGTAAGGTTGGGAAGGTTCCAATTGATACTGGGACTGGGATGTGCTGTTTTGAGGATCCCTTGGATGAAAAACCTCCTGCACTGATCAGTTCATGTGGCAATGCCAAGATGTCTGGGTATGATGACAGCAAGCCTCAGAGCTCATTGTCCAAAGGTTGTGACAATGTACTAGTAGATAGTAGAGATGATGACGAAAACTTTTCTGGGTATGCTCACCCTAGTACCAAAATAAATTCCTTTAAGCAAATTACTTGTATAGATGATAGAAAAATAAAGAAAACATTGGATTCTAAATATCATAAAGTTTCTCAAGAATCCAAGCACGATATACTATCTAACAGTGTTTTGGATGGAAATTTGAAGTCAGTTTACAGCAGTAGGAAGAACTATTATAAAAGCCAAAGATCTCAAATGTGTATTCCTTTCAAAAAGAGGAAGCTTTTTAACTGCAGCAGCTCTGATACAAATTCTAACGGATATATCAGAAGTGATGACACTTGTTATTCACCCAAGAATGACACGAACCAAAGTGTTTCTTGTTCATCTTCTGATCATGGAACATCATCCTTGGGACACTCTGCATTACGATCTAGAGATTCTCATGTGAAGCTTAGGATCAAATCATTCAGAGTGCCTGAGCTTTTTATCGAGATTCCAGAAACTGCAACCGTCGGGTCCCTGAAGAGGACAGTGATGGAGGCAGTGACTGCTGTACTTGGAGGTGGATTGCGCGTGGGTGTGATTCTCCATGGAAAGAAGGTTAGAGATGACAGTAAAACTCTACTTCAGACTGGAATTTCTCATGATAACCACCTGGATGCTTTGGGCTTTGCCTTGGAGCCTAATTGTTCACAAAACCGATCATCTGCATGTGCTACAACAGATTCTCTCTGCGTTCCTGGTGCAGATATGCATCAGCCTTTAATAGGGTATCCTTCAAGTCGTGCTGCAATTCATCAGAGGATTCAGGGCTTTTCTAACATGTTAGCTGAGCATCAAGCAACCGGTTTAGGTAACCTTGTTGAAAGTGATCATGACTCAGCACCTTCTCCAATCAACACATCAGGTGAAAAAAATTTGACAGATTCAAAAGAACTTATTACTGTTCCTGAAATGGGTATGGAGGCACTAGCTGTACTACCTGTGCATCAGAAGTCAAAGCGAACTGAGATCGCACCACGCCGAATTCGTAGGCCCTTTTCTGTTGCTGAAGTGGAAGCATTGGTTCAAGCAGTTGAGAAACTTGGAACTGGAAGGTGGCGTGATGTTAAACTTCATGCTTTTGATAATGCAAAGCATCGGACATACGTCGATTTGAAGGATAAATGGAAAACACTGGTGCACACAGCAAGAATATCACCTCAGCAAAGGAGGGGAGAGCCTGTTCCCCAAGAACTTTTGGACAGGGTCCTAACTGCCCACGCATATTGGTCCCAGCAGCAGACTAAGCAACAGCTCAAGCACCACTCTACAAAACCTTGCCTTCTCCTTTAA 2151 0.4156 MVLQKRLDYSFYGYHVPTKRRATRSAKRRATFQRRLEDNQMCAFDLLATIADNLLQEKQNPTISSDRSSEKDRDGFSKVECQDANKPFKTELSDEASCDRKCQHEFVREGCPDANKPFKAELSDEGSSDRKCFSNISSQLYNQNCCLKELLQHEIDGHSCIASIVTSSSCSEKIVAERLVDGKGHNGVENLASKVELGSSGCLESSGCKLDGDVSKVKDGKVGKVPIDTGTGMCCFEDPLDEKPPALISSCGNAKMSGYDDSKPQSSLSKGCDNVLVDSRDDDENFSGYAHPSTKINSFKQITCIDDRKIKKTLDSKYHKVSQESKHDILSNSVLDGNLKSVYSSRKNYYKSQRSQMCIPFKKRKLFNCSSSDTNSNGYIRSDDTCYSPKNDTNQSVSCSSSDHGTSSLGHSALRSRDSHVKLRIKSFRVPELFIEIPETATVGSLKRTVMEAVTAVLGGGLRVGVILHGKKVRDDSKTLLQTGISHDNHLDALGFALEPNCSQNRSSACATTDSLCVPGADMHQPLIGYPSSRAAIHQRIQGFSNMLAEHQATGLGNLVESDHDSAPSPINTSGEKNLTDSKELITVPEMGMEALAVLPVHQKSKRTEIAPRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLHAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWSQQQTKQQLKHHSTKPCLLL* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0329 716 ProSiteProfiles Ubiquitin domain profile. 421 491 IPR000626 GO:0005515
Gso15g0329 716 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 715 IPR031105 -
Gso15g0329 716 SUPERFAMILY Ubiquitin-like 416 507 IPR029071 -
Gso15g0329 716 PANTHER TELOMERE REPEAT-BINDING PROTEIN 2-RELATED 1 715 - -
Gso15g0329 716 MobiDBLite consensus disorder prediction 391 412 - -
Gso15g0329 716 SMART sant 615 668 IPR001005 -
Gso15g0329 716 CDD SANT_TRF 617 667 - -
Gso15g0329 716 Gene3D - 604 708 - -
Gso15g0329 716 ProSiteProfiles Myb-like domain profile. 611 666 IPR001005 -
Gso15g0329 716 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 611 670 IPR017930 -
Gso15g0329 716 SUPERFAMILY Homeodomain-like 617 698 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0329 Gso-Chr15 2964397 2970406 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0329 - - gmx:100780881 1390.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0329 15 2964397 2970406 Gso11g3480 11 50686100 50692894 GST
Gso15g0329 15 2964397 2970406 Gso12g0514 12 4589421 4594743 PCT
Gso15g0329 15 2964397 2970406 Gso11g1176 11 10563573 10568862 PCT
Gso12g0514 12 4589421 4594743 Gso15g0329 15 2964397 2970406 PCT
Gso11g1176 11 10563573 10568862 Gso15g0329 15 2964397 2970406 PCT