Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0325 ATGCTAGCGTCATTATCCTGCCACGGTGATATTGATAACTGGTTTTTGATATTTTCATATCTCGATGGCACCCTTTATCCTTTGAGTTCTGGATTGGCTGAGCAAGTGAAAAAAAATATTCAGGAGTACATGCTTCAAAAGCTTGGGATACCGGAGGCTAAGGTTCCTGAGTCGTGCTTTTCATTATACAAGACTTACGGGACAACCATGGCAGGTCTCAAGGCTATTGGCTATGACTTTGACTATGATGACTTTCATGCATTTATTCATGGGAGATTGCCATATGATATGCTGAAACCTGACCCTGTTCTCAGGGGAATTTTGCTGAGCTTGCCTGTTCCAAAAATTGTTTTTACAAACTCAGACAAGGTCCATGCAAGTAGAGTGCTTCATAGGCTTGGACTAGAGGATTGCTTTGAAAGAGTTATAAGCTTTGAGACCCTGAATTCCTCCAATGAAGATGGCAATGAATATAAACCAAGTTCCACAGGGATTTTTGATTTTTATGAGTACATTCGCAGGCCTGATTCTGATATTTTGCTTCCAAGGACCCCGGTTGTGTGCAAACCCTTTCAAGATGCATTTGAAAAGGTTTTCGATATGGCAGATATTGACCCTCAAAGAACATTATTCTTCGATGACAGTCTCCGCAATTTACAAACGGGAAAATCCTTGGGCCTCCACACAGTCATGGTGGCTGCATCCCGTCGTGCTACGGGAGTGGATCATGCCTTAGAAAGCATCCATAATATGAAGGAGGCATTTCCAGAACTGTGGGAAGCCAATGAGAAGCCTGAAAGTGTCGAGTGCTCTTGA 816 0.4277 MLASLSCHGDIDNWFLIFSYLDGTLYPLSSGLAEQVKKNIQEYMLQKLGIPEAKVPESCFSLYKTYGTTMAGLKAIGYDFDYDDFHAFIHGRLPYDMLKPDPVLRGILLSLPVPKIVFTNSDKVHASRVLHRLGLEDCFERVISFETLNSSNEDGNEYKPSSTGIFDFYEYIRRPDSDILLPRTPVVCKPFQDAFEKVFDMADIDPQRTLFFDDSLRNLQTGKSLGLHTVMVAASRRATGVDHALESIHNMKEAFPELWEANEKPESVECS* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0325 271 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 184 232 IPR006439 -
Gso15g0325 271 Gene3D - 78 259 IPR023214 -
Gso15g0325 271 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 16 271 - -
Gso15g0325 271 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 16 271 - -
Gso15g0325 271 SUPERFAMILY HAD-like 21 252 IPR036412 -
Gso15g0325 271 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 20 232 IPR010237 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0325 Gso-Chr15 2921084 2923744 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0325 K07025 - gmx:100777668 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0325 15 2921084 2923744 Gso11g3483 11 50730997 50733487 GST
Gso15g0325 15 2921084 2923744 Gso12g0506 12 4507574 4510930 PCT
Gso15g0325 15 2921084 2923744 Gso11g1169 11 10501262 10504926 PCT
Gso12g0506 12 4507574 4510930 Gso15g0325 15 2921084 2923744 PCT
Gso11g1169 11 10501262 10504926 Gso15g0325 15 2921084 2923744 PCT