Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3483 ATGGAAAACGGGGATCAGTTCCAGGAAATTTCAAAGGGGAAATATGATTGTCTTTTATTTGATCTTGATGACACCCTTTATCCTTTGAGTTCTGGATTGGCTGAGCAAGTGAAAAAAAATATTCAGGAGTACATGCTTCAAAAGCTTTGGATATCAGAGGCTAAAGTTCCTGAGTTGTGCTTTTCATTATACAAGACTTACGGGACAACCATGGCCGGTCTCAAGGCTATTGGCTATGACTTTGACTATGATGACTTTCATGGCTTTGTTCATGGGAGATTGCCATATGATATGCTGAAACCTGACCCTGTTCTCAGGGGAATTTTGCTAAGCTTGCCTGTTCGAAAAGTTGTTTTTACAAACTCTGACAAGGCTCATGCAAGCAGAGTGCTTCATAGGCTTGGATTGGAGGATTGCTTCGAAAGAGTTATAAGCTTTGAGACCCTTAATTCCTCCAATGAAGATGGCAGTGAATATAAACAAAGTTCCACAGAGATTTTTGATTTTTATGAGTACATTGGCAGGCCTGATTCTGATATCGTGCTTCCAAGGACCCCGGTTGTGTGCAAACCCTTTCAAGATGCATATGAAAAGGTTTTCAATATGGCAGATATTGACCCTCAAAGAACATTATTCTTTGATGACAGTCTCCGCAATTTACAAACGGGAAAATCCTTGGGCCTCCACACTGTCTTGGTGGGTACATCCGTTCGAACTACGGGAGTGGATCATGCCTTAGAGAGCATCCATAATATGAAGGAGGCATTTCCAGAACTATGGGAAGCCAATGAAAAGCCTGAAAGTGTCGAGTGCTCTAGAAAGGTTTCAATTGAAACATCAGTAATAGCCTAA 852 0.4131 MENGDQFQEISKGKYDCLLFDLDDTLYPLSSGLAEQVKKNIQEYMLQKLWISEAKVPELCFSLYKTYGTTMAGLKAIGYDFDYDDFHGFVHGRLPYDMLKPDPVLRGILLSLPVRKVVFTNSDKAHASRVLHRLGLEDCFERVISFETLNSSNEDGSEYKQSSTEIFDFYEYIGRPDSDIVLPRTPVVCKPFQDAYEKVFNMADIDPQRTLFFDDSLRNLQTGKSLGLHTVLVGTSVRTTGVDHALESIHNMKEAFPELWEANEKPESVECSRKVSIETSVIA* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3483 283 Gene3D - 6 96 - -
Gso11g3483 283 SUPERFAMILY HAD-like 17 237 IPR036412 -
Gso11g3483 283 SFLD C1.5.3: 5'-Nucleotidase Like 12 263 IPR010237 -
Gso11g3483 283 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 16 233 IPR010237 -
Gso11g3483 283 Gene3D - 97 258 IPR023214 -
Gso11g3483 283 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 12 263 - -
Gso11g3483 283 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 185 233 IPR006439 -
Gso11g3483 283 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 283 - -
Gso11g3483 283 CDD HAD_5NT 17 235 IPR010237 -
Gso11g3483 283 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3483 Gso-Chr11 50730997 50733487 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3483 K07025 - gmx:100790444 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0325 15 2921084 2923744 Gso11g3483 11 50730997 50733487 GST
Gso11g3483 11 50730997 50733487 Gso12g0506 12 4507574 4510930 PCT
Gso11g3483 11 50730997 50733487 Gso11g1169 11 10501262 10504926 PCT
Gso12g0506 12 4507574 4510930 Gso11g3483 11 50730997 50733487 PCT
Gso11g1169 11 10501262 10504926 Gso11g3483 11 50730997 50733487 PCT