Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1169 ATGGAAGACGGGCATAAGTTCCAGGAAGTTCCAAAGCCAAAATATGATTGTCTTTTATTTGATCTTGATGACACCCTTTATCCTTATAGTTCTGGAGTCTCAGTGCAAATAGCAAAAAATATTGATGAGTTTATGATTCAAAAGCTGGGGATGGAGGCTGCCAAAGTTGCCGAATTGAACTATCCATTATATAAGACTTATGGGACGACGATGGCTGGTTTAAGGGCAATTGGCTATGACTTTGACTATGATGACTTTAACAGTTTTGTTCATGGGAGATTGCCATATGATGTGCTGCTGAAACCAGATCCTGTTCTCAGGGGCATTTTGCAAAGCCTGCCTGTTAGGAAACTTATTTTTACGAATGCTGACTCAAACCATGCGATTAGAGCGCTTAAAACCCTTGGACTGGAGGACTGCTTTGAAAGTATTATAAGCTTTGACACTCTGAATCCCTCCAACAACACCAATCCTTCTTATAATAAAGATGGCAGTGAATCCCGATCAACCACCTCCGAAATTTTTTACTTTTGTGAGTACATAAGACCGGCGGAATCTGATATGGTGCTTCCAAGGACCCCAGTTGTCTGTAAACCCTTTGATGATGCATTTGAAAATGCTTTCAAGTTAGCAGATATTGACCCACAAAGAACATTGTTTTTTGATGACAGCATCCGCAACTTATTGACAGCCAAACGCTTGGGCCTCCACACAGTTGCAGTTGGTACATCTGTTCGTACCACCGGAGTGGATCATGCATTGGAGAGTATTCATAATATCAAGGAGGCATTCCCTGAGCTTTGGGATGCTGCTGACGAGAAGCATGAATTTGTGCAGTACAAGGTTGGAATTGAAGTAAAAGCTTAG 867 0.4164 MEDGHKFQEVPKPKYDCLLFDLDDTLYPYSSGVSVQIAKNIDEFMIQKLGMEAAKVAELNYPLYKTYGTTMAGLRAIGYDFDYDDFNSFVHGRLPYDVLLKPDPVLRGILQSLPVRKLIFTNADSNHAIRALKTLGLEDCFESIISFDTLNPSNNTNPSYNKDGSESRSTTSEIFYFCEYIRPAESDMVLPRTPVVCKPFDDAFENAFKLADIDPQRTLFFDDSIRNLLTAKRLGLHTVAVGTSVRTTGVDHALESIHNIKEAFPELWDAADEKHEFVQYKVGIEVKA* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1169 288 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 193 241 IPR006439 -
Gso11g1169 288 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 16 240 IPR010237 -
Gso11g1169 288 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 288 - -
Gso11g1169 288 SUPERFAMILY HAD-like 17 245 IPR036412 -
Gso11g1169 288 SFLD Haloacid Dehalogenase 11 273 - -
Gso11g1169 288 SFLD C1.5.3: 5'-Nucleotidase Like 11 273 IPR010237 -
Gso11g1169 288 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 288 - -
Gso11g1169 288 Gene3D - 79 268 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1169 Gso-Chr11 10501262 10504926 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1169 K07025 - gmx:100807005 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1169 11 10501262 10504926 Gso11g1169 11 10501262 10504926 ECH
Gso12g0506 12 4507574 4510930 Gso11g1169 11 10501262 10504926 GST
Gso15g0325 15 2921084 2923744 Gso11g1169 11 10501262 10504926 PCT
Gso11g3483 11 50730997 50733487 Gso11g1169 11 10501262 10504926 PCT
Gso11g1169 11 10501262 10504926 Gso15g0325 15 2921084 2923744 PCT
Gso11g1169 11 10501262 10504926 Gso11g3483 11 50730997 50733487 PCT