Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0292 ATGGCTTTTCTGTTTGCCTTTGTTGCTATTGTGGTGTGGGGTTGTGCTGCGGGTAAAGAGTGCACAAACAATGATGCCCAATCACATACTTTCCGGTACCAGTTATCCACATCCACGAATGAAACTTGGAACATAATGTCACATAATCATTTGACGACAAAGGATGACCATTTATTGGCTGATTTGCTACCAAGGAAGTTGTTGAAAGAGGAAAATCAACGTAATTTGGATATGTTGAGGAAAATTGAGAAAGTGGGTGTGTTGAAGCCACCCCAGCAACCCCAAGATTTTCTCAAACCAGTGTCTCTGCATGATGTGAGATTGAGTCAAGGTTCAATCCATGCTCAGGCACAACAAACAAACTTAGAGTATCTGTTGATGTTGGATGTGGACAGGTTACTCTGGAGCTTTAGGAAGACAGCTGGCCTTCCAACTCCTGGAACACCATATGGAGGGTGGGAAGATCCAAAAATGGAGCTTCGGGGGCATTTTGTTGAACCTGGAGTGATGATATATATGCTTCCACAAGGTCGTGGGGTTTCCAAGGCTAAAACTTACTTTGGTTGGGGAACCAAGTTTGATAGTTTCTGGTGCTGCTATGGGACAGGAATTGAATCATTCTCAAAGCTGGGAGATTCTATCTATTTTGAAGAGCAAGGGGAAAATCCTACTCTTTACATCATCCAGTACATATCAAGCTTATTTAATTGGAAATCTGGGCAAATTATCCTTAATCAGACAGTTGTTCCACCTGCTTCATGGGATCCTTTCCTACGAGTGTCATTTACATTTTCTCCTGCTAAGAAAACTGGTGCTTTGTCTACGCTTAACTTCAGACTACCAACTCGGATGCACAAGAATGGTGAAAAAGGCATATTAAATAATGAGACTTTAACTCTGCCAGGGCCAGGCAATTTTTTGTCGATCACGCGAAAATGGAATGCTGGTGACAAGCTAAGCCTTCAATTGCCCCTTACCCTCAGAGCAGAGGCCATAAAAGATGATAGGACTAAATATGCCTCTATTCAAGCAATTCTTTATGGTCCCTATCTTCTTGCTGGTAACACCACTGGTGATTGGAACATTAAAACTGCAGCAAATGCTTCTATAGCAGACTGGATTACTCCAATTCCAGCCAGCTACAACAGCCACTTATTCTACTTCTCCCAAGCCTTTGCAAACTCGACTTTTGTTTTGACAAACTCAAACCAATCATTAGCAGTGAAAAAAGTACCTGAGCCTGGAACTGATTCAGCTCTTGGTGCCACTTTTAGAGTTATCCAAGGAAAATCTTCCACAAAGTTTACCACATTGACAGATGCTATTGGTAAATCAGTGATGTTAGAACCATTTGATCATCCGGGAATGCAAGTGATTCACCAAGGAATAGAACTTCCTCTTACAGTCGTAGGCTCTTCCTCTGGTGGACCATCTTCTGTTTTTGTTGTGGTACCGGGATTGGATGGACAAAAAGAAACCATATCTTTAGAATCCAAAAGCCATAATGGTTGCTTCGTGCACAGTGGCTTGCGTTCTGGTAGAGGAGTGAAGCTCAGTTGCAAGACTACTTCTGATGCTACATTTAACCAAGCAGCAAGTTTTATTGCCAAGAGAGGAATAAGCAAATATAATCCTATCAGCTTTGTGGCCAAAGGGGAAAACAGGAATTTTCTTCTGGAACCGTTATTGGCCTTTAGAGATGAGTCTTATACGGTTTATTTCAACATTAAAGGTTGA 1737 0.418 MAFLFAFVAIVVWGCAAGKECTNNDAQSHTFRYQLSTSTNETWNIMSHNHLTTKDDHLLADLLPRKLLKEENQRNLDMLRKIEKVGVLKPPQQPQDFLKPVSLHDVRLSQGSIHAQAQQTNLEYLLMLDVDRLLWSFRKTAGLPTPGTPYGGWEDPKMELRGHFVEPGVMIYMLPQGRGVSKAKTYFGWGTKFDSFWCCYGTGIESFSKLGDSIYFEEQGENPTLYIIQYISSLFNWKSGQIILNQTVVPPASWDPFLRVSFTFSPAKKTGALSTLNFRLPTRMHKNGEKGILNNETLTLPGPGNFLSITRKWNAGDKLSLQLPLTLRAEAIKDDRTKYASIQAILYGPYLLAGNTTGDWNIKTAANASIADWITPIPASYNSHLFYFSQAFANSTFVLTNSNQSLAVKKVPEPGTDSALGATFRVIQGKSSTKFTTLTDAIGKSVMLEPFDHPGMQVIHQGIELPLTVVGSSSGGPSSVFVVVPGLDGQKETISLESKSHNGCFVHSGLRSGRGVKLSCKTTSDATFNQAASFIAKRGISKYNPISFVAKGENRNFLLEPLLAFRDESYTVYFNIKG* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0292 578 PANTHER - 166 577 - -
Gso15g0292 578 PANTHER - 9 165 - -
Gso15g0292 578 PANTHER PROLINE-TRNA LIGASE (DUF1680) 166 577 - -
Gso15g0292 578 PANTHER PROLINE-TRNA LIGASE (DUF1680) 9 165 - -
Gso15g0292 578 SUPERFAMILY AbfB domain 445 558 IPR036195 GO:0046373|GO:0046556
Gso15g0292 578 Pfam Beta-L-arabinofuranosidase, GH127 168 353 IPR012878 -
Gso15g0292 578 Pfam Beta-L-arabinofuranosidase, GH127 105 165 IPR012878 -
Gso15g0292 578 Gene3D - 437 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0292 Gso-Chr15 2662220 2666486 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0292 K09955 - gmx:100791803 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0292 15 2662220 2666486 Gso12g0465 12 4100852 4107687 PCT
Gso15g0292 15 2662220 2666486 Gso11g1120 11 10077010 10083882 PCT
Gso11g1119 11 10065767 10073240 Gso15g0292 15 2662220 2666486 PCT