Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1119 ATGGAAGCTTTTGTGTTTGTGTTTGTGGTCCTTGTGTTGTGTGGTTGTGCTGCTGGTAAGGAGTGCACAAACATTCCTACACAATCACACACGCTAAGGTACCAGCTATTGACATCCAAGAATGGAAGATTGGAGGAAAAGGCCATGTCTCACTTTCATTTGACGCCTACAGATGAATCTGAATGGGCAGATTTGCTGCCGAGGAAATTATTGACAGAACAACATCAACACGATTGGGCGGTTATGTATAAGAATATTAAGAACATGGGTGTGTTCAAGTCACCTGAAGGCTTTCTCAAAGAAGTTCCTCTTCAGGATGTGAGGTTGCATGAGGATTCCATCCATGGTATAGCACAACAGACAAATTTGGAGTATCTTTTGATGTTGGATGTGGACAGCTTGATTTGGAGCTTTAGGAAGACGGCTGGTCTATCCACACCTGGGACTCCTTATGGAGGGTGGGAAGCTCCAGACGTTGAGCTCCGGGGTCATTTTGTTGGGCATTACTTGAGTGCATCAGCTCTAATGTGGGCCATCACACAGAATGATACCCTGAAACAGAAAATGTCATACCTCGTTGCTGGTCTGTCTGACTGTCAGAAGAAAATTGGAACTGGATATCTATCTGCCTTTCCATCTGAGTTGTTTGATCGATTTGAAGCTATTCAAGAAGTTTGGGCTCCATACTATACCATTCACAAGATCTTGGCCGGCCTCTTGGACCAACATACTTTTGCTGGAAACCCTCAAGCTCTAAAAATGGTAACATGGATGGTTGATTACTTCTACAACAGAGTCCAGACTGTAATAACAAAGTACACTTTAAATAGGCACTATGAATCACTGAATGAGGAAACTGGAGGAATGAATGACGTCCTTTATAAGTTATACATCATAACGGGAGATTCTAAGCATCTATTGTTGGCTCACCTTTTTGATAAGCCATGCTTTTTAGGGTTGCTTGCAGTGCAGGCTAATGACATAGCTGATTTTCATGCTAATACACATATCCCAGTTGTTGTTGGATCTCAAATGCGGTATGAAATCACAGGCGATCCACTTTATCAGCAAATTGGGACATTCTTTATGGACCTCGTAAACTCTTCTCACAGTTATGCAACTGGAGGGACATCAGTCAGCGAGTTCTGGAGTGATCCAAAGAGAATGGCAGATACCTTAAAAACGACAGAGAATGAAGAATCATGCACAACTTATAATATGTTGAAGGTTTCGCGCCACCTGTTTAAATGGACCAAAGAAGTCTCTTATGCAGACTATTACGAACGTGCCTTGACCAATGGTGTGCTCAGCATTCAAAGAGGAACCGATCCTGGAGTGATGATTTATATGCTTCCACTAGGTCTTGGGGTTTCCAAGGCTAAAACTTACCATAGTTGGGGAACACCATTTGACTCTTTCTGGTGCTGCTATGGAACGGGAATTGAATCGTTCTCAAAGCTGGGAGATTCTATCTATTTTGAAGAGGAAGGCAAAGATCCTACACTTTACATCATTCAGTACATATCAAGCTCGTTTAATTGGAAATCTGGCAAAGTTTTGCTCAATCAGACAGTTGATCCAGTTGCTTCATGGGATCCTTACCTACGAGTGGCATTTACGTTTTCTCCATTTGAGAATACTTTGACTACAAACTCTACATTGAACTTTCGACTCCCAACTTGGACTCATCTGGATGGTGCCAAGGGGATATTAAATGCTGAAACTTTATCTCTACCAAGTCCAGGAAATTATTTATCAATCACAAGACAATGGAGTGGTAGTGACAAGCTGACCCTTCAGCTGCCCCTTACCGTAAGGACAGAGGCCATAAAAGATGACAGGCCAGAATATGCCTCTGTTCAAGCAATTCTTTATGGTCCTTATCTTCTTGCGGGTCATACAACTGGTGTTGATTGGGATCTTAAAGCTGGGGCTAACAATTCAGACTGGATTACTCCTATTCCTGCCAGTTACAATAGTCAACTAGTTTCTTTTTCTCAAGACTTTGAAAATTCAACTTTTATTTTGGCAAATTCAAATCAATCACTTGCAATGCAAAAATTGCCTCTATCTGGCACTGATTTGGCTCTTCAGGCAACCTTTAGGCTTGTTGTCCTAAATGAATCTTCCTCAAAGTTTTCAACATTGGCAGATGCTAATGGTAAATCAGTGATGTTAGAACCATTTGATTTTCCTGGAATGAATGTGGTTAACCAAGGAGCAGACAAACCTCTTCTCATCATAGATTCATCCCATGGCGGGACATCTTCTGTTTTTCTTGTAGTTCCGGGACTGGATGGACGAAATGAAACCATATCTTTAGAATCCCAGAGCTACAATGGCTGTTATGTGTATAGTGGTATGAGCTCTATTGCAGGAGTGAAGCTCAGTTGCAAATCTGGTTCTGATGCTAGTTTTAACCAAGCAACAAGCTTTGTTGCTCAAAAAGGATTGAGCCAATACAATCCTATCAGTTTTGTGGCTAAAGGGGCAAACAGGAATTTTCTTTTGGAGCCACTATTCTCATTCAGAGATGAGCATTATACTGTTTATTTCAACATTCAAGGTTGA 2571 0.4146 MEAFVFVFVVLVLCGCAAGKECTNIPTQSHTLRYQLLTSKNGRLEEKAMSHFHLTPTDESEWADLLPRKLLTEQHQHDWAVMYKNIKNMGVFKSPEGFLKEVPLQDVRLHEDSIHGIAQQTNLEYLLMLDVDSLIWSFRKTAGLSTPGTPYGGWEAPDVELRGHFVGHYLSASALMWAITQNDTLKQKMSYLVAGLSDCQKKIGTGYLSAFPSELFDRFEAIQEVWAPYYTIHKILAGLLDQHTFAGNPQALKMVTWMVDYFYNRVQTVITKYTLNRHYESLNEETGGMNDVLYKLYIITGDSKHLLLAHLFDKPCFLGLLAVQANDIADFHANTHIPVVVGSQMRYEITGDPLYQQIGTFFMDLVNSSHSYATGGTSVSEFWSDPKRMADTLKTTENEESCTTYNMLKVSRHLFKWTKEVSYADYYERALTNGVLSIQRGTDPGVMIYMLPLGLGVSKAKTYHSWGTPFDSFWCCYGTGIESFSKLGDSIYFEEEGKDPTLYIIQYISSSFNWKSGKVLLNQTVDPVASWDPYLRVAFTFSPFENTLTTNSTLNFRLPTWTHLDGAKGILNAETLSLPSPGNYLSITRQWSGSDKLTLQLPLTVRTEAIKDDRPEYASVQAILYGPYLLAGHTTGVDWDLKAGANNSDWITPIPASYNSQLVSFSQDFENSTFILANSNQSLAMQKLPLSGTDLALQATFRLVVLNESSSKFSTLADANGKSVMLEPFDFPGMNVVNQGADKPLLIIDSSHGGTSSVFLVVPGLDGRNETISLESQSYNGCYVYSGMSSIAGVKLSCKSGSDASFNQATSFVAQKGLSQYNPISFVAKGANRNFLLEPLFSFRDEHYTVYFNIQG* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1119 856 SUPERFAMILY Six-hairpin glycosidases 163 474 IPR008928 GO:0005975
Gso11g1119 856 Pfam Beta-L-arabinofuranosidase, GH127 107 631 IPR012878 -
Gso11g1119 856 PANTHER - 7 855 - -
Gso11g1119 856 SUPERFAMILY AbfB domain 756 837 IPR036195 GO:0046373|GO:0046556
Gso11g1119 856 Gene3D - 714 844 - -
Gso11g1119 856 PANTHER PROLINE-TRNA LIGASE (DUF1680) 7 855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1119 Gso-Chr11 10065767 10073240 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1119 K09955 - gmx:100791803 1736.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1119 11 10065767 10073240 Gso15g0292 15 2662220 2666486 PCT