Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0465 ATGACCATTTTTGCAACTTCAATGCCCGTGTTGTCCATTGTTCATCCGAGAATGGAGGCGTTAGTGTTTGCGCTTGTGGCCATTCTGTTGTGTGGTTGTGATGCTGCTAAAGAATGCACAAACATTCCTACACAATCTCATACATTCAGGTATGAGCTATTGATGTCCACTAATGCAACGTGGAAAGCAGAGGTGATGGATCACTACCATTTGACGCCAACGGATGAAACGGCTTGGGCGGATTTGCTGCCGAGGAAGTTATTGTCAGAACAGAACCAACATGACTGGGGGGTGATGTATAGGAAGATTAAGAACATGGGTGTGTTCAAGTCAGGTGAAGGATTTCTCAAAGAAGTGCCTCTTCAGGATGTGAGGTTGCATAAGGATTCCATCCATGGTAGAGCACAGCAAACAAATTTGGAGTATCTGTTGATGTTGGATGTGGACAGCTTGATTTGGAGCTTCAGGAAGACAGCTGCTCTATCCACACCTGGGACTCCTTATGGAGGGTGGGAAGGTCCAGAAGTTGAGCTCAGAGGTCATTTTGTTGGGCATTACTTGAGCGCATCAGCTCTAATGTGGGCCAGCACACAGAATGATACCCTGAAGCAGAAAATGTCATCTCTTGTTGCTGGTCTGTCTGCCTGTCAGGAGAAAATTGGAACCGGATATCTATCTGCATTTCCATCTGAGTTTTTTGATCGATTTGAAGCTGTTCAACCTGTTTGGGCTCCCTATTATACCATTCACAAGATCTTGGCTGGCCTCTTGGATCAACATACTTTTGCTGGAAACCCTCAAGCTCTAAAAATGGTAACATGGATGGTTGATTACTTCTACAACAGAGTGCAGAATGTAATAACAAAGTACACTGTAAATAGACACTATCAATCAATGAATGAAGAAACTGGAGGAATGAATGATGTCCTTTATAGATTATACAGCATAACGGGAGATTCTAAGCACCTAGTGTTGGCTCACCTTTTTGACAAGCCATGCTTTTTAGGGTTGCTTGCAGTGCAGGCTAATGACATAGCTGATTTACATGCTAATACACATATCCCAATTGTTGTTGGATCTCAAATGCGGTATGAAATCACAGGCGATCCACTTTATAAGCAAATTGGCACATTCTTTATGGACCTCGTAAACTCTTCTCACAGCTACGCAACTGGAGGGACATCAGTCAGAGAGTTCTGGAGTGATCCAAAGAGAATAGCAGACAACTTAAGAACGACAGAGAATGAAGAATCATGCACAACTTATAATATGTTGAAGGTTTCGCGTCACCTGTTTAGATGGACCAAAGAAGTCTCTTATGCAGACTATTATGAGCGTGCCTTAACCAATGGTGTGCTCAGCATTCAAAGAGGAACAGATCCTGGAGTGATGATTTATATGCTTCCACTAGGTTTTGCGGTTTCAAAGGCTAGAACTGGACATAGTTGGGGAACACAGTTTGACTCTTTCTGGTGCTGCTATGGAACAGGAATTGAATCATTCTCAAAGCTGGGGGATTCTATCTATTTTGAAGAGGAAGGCAAAGATCCTACACTTTACATCATTCAGTACATTTCAAGCTCATTTAATTGGAAATCAGGCAAAATTTTGCTCAATCAGACAGTTGTTCCAGCTTCTTCATCGGATCCTTACCTACGAGTCACATTTACATTTTCTCCTGTTGAGAATACTTTGTCTACATTGAACTTTCGACTACCAAGTTGGACTCTTCTGGATGGTGCCAAGGGGATATTAAATGGTCAAACTTTATCTCTGCCAAATCCAGGAAATTATTTGTCAATCACAAGACAATGGAGTGCTAATGACAAGCTGACCCTTCAGCTGCCCCTTACCGTAAGGACAGAGGCCATAAAAGATGACAGGCCTGAATATGCATCTGTTCAAGCAATTCTTTATGGTCCTTACCTTCTTGCTGGTCATACAACCGGTGGTGATTGGAACCTTAAAGCTGGGGCTAACAATGCAGACTGGATTACTCCTATTCCTGCCAGTTACAATAGTCAGCTAGTTTCTTTTTTCCGAGACTTTGAAGGATCAACTTTTGTCTTGGCAAATTCAAACCAATCAGTTTCAATGCAAAAATTGCCTGAATTTGGCACTGATTTGGCTCTTCAGGCAACCTTTAGGATTGTCCTAGAAGAATCTTCCTCAAAGTTTTCAAAATTAGCAGATGCTAATGATAGATCAGTGATGTTAGAACCATTTGATCTTCCTGGAATGAATGTGATTCACCAAGGAGCAGGCAAACCTCTTCTCACTGTAGATTCTTCCCAAGGGGGGCCGTCTGCTGTTTTTCTTTTGGTACCAGGATTGGATGGACGAAATGAAACCGTATCTTTAGAATCCCAGAGCAACAAGGGATGTTATGTGTACAGTGGTATGAGCCCTAGTGCAGGAGTCAAGCTCAGTTGCAAATCTGATTCTGATGCTACTTTTAACCAAGCAGCAAGCTTTGTTGCTCTGCAAGGATTGAGCCAATACAATCCTATCAGTTTTGTGGCTAAAGGGGCAAACAGGAATTTTCTTTTGCAGCCATTACTCTCATTCAGAGACGAGCATTACACAGTTTATTTCAATATTCAAGATTGA 2610 0.4218 MTIFATSMPVLSIVHPRMEALVFALVAILLCGCDAAKECTNIPTQSHTFRYELLMSTNATWKAEVMDHYHLTPTDETAWADLLPRKLLSEQNQHDWGVMYRKIKNMGVFKSGEGFLKEVPLQDVRLHKDSIHGRAQQTNLEYLLMLDVDSLIWSFRKTAALSTPGTPYGGWEGPEVELRGHFVGHYLSASALMWASTQNDTLKQKMSSLVAGLSACQEKIGTGYLSAFPSEFFDRFEAVQPVWAPYYTIHKILAGLLDQHTFAGNPQALKMVTWMVDYFYNRVQNVITKYTVNRHYQSMNEETGGMNDVLYRLYSITGDSKHLVLAHLFDKPCFLGLLAVQANDIADLHANTHIPIVVGSQMRYEITGDPLYKQIGTFFMDLVNSSHSYATGGTSVREFWSDPKRIADNLRTTENEESCTTYNMLKVSRHLFRWTKEVSYADYYERALTNGVLSIQRGTDPGVMIYMLPLGFAVSKARTGHSWGTQFDSFWCCYGTGIESFSKLGDSIYFEEEGKDPTLYIIQYISSSFNWKSGKILLNQTVVPASSSDPYLRVTFTFSPVENTLSTLNFRLPSWTLLDGAKGILNGQTLSLPNPGNYLSITRQWSANDKLTLQLPLTVRTEAIKDDRPEYASVQAILYGPYLLAGHTTGGDWNLKAGANNADWITPIPASYNSQLVSFFRDFEGSTFVLANSNQSVSMQKLPEFGTDLALQATFRIVLEESSSKFSKLADANDRSVMLEPFDLPGMNVIHQGAGKPLLTVDSSQGGPSAVFLLVPGLDGRNETVSLESQSNKGCYVYSGMSPSAGVKLSCKSDSDATFNQAASFVALQGLSQYNPISFVAKGANRNFLLQPLLSFRDEHYTVYFNIQD* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0465 869 Pfam Beta-L-arabinofuranosidase, GH127 124 645 IPR012878 -
Gso12g0465 869 PANTHER - 22 868 - -
Gso12g0465 869 PANTHER PROLINE-TRNA LIGASE (DUF1680) 22 868 - -
Gso12g0465 869 Gene3D - 730 855 - -
Gso12g0465 869 SUPERFAMILY AbfB domain 736 849 IPR036195 GO:0046373|GO:0046556
Gso12g0465 869 SUPERFAMILY Six-hairpin glycosidases 165 455 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0465 Gso-Chr12 4100852 4107687 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0465 K09955 - gmx:100783150 1765.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0465 12 4100852 4107687 Gso11g1120 11 10077010 10083882 GST
Gso15g0292 15 2662220 2666486 Gso12g0465 12 4100852 4107687 PCT