Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1120 ATGTCCATTTTTGCAACTTCGATGCCCGTGTTGTCCATTGTTCATCCGAGGAGGATGGAGGCTTTTGTATTTGTGTTTGTGGCCATTCTGTTGTGTGGTTGTGTTGCTGCTAAAGAGTGCACAAACATTCCAACACAATCTCATACATTCAGGTATGAGCTGTTGATGTCCAAGAATGCAACATGGAAGGCAGAGGTGATGGATCACTACCATTTGACACCAACGGATGAAACGGTTTGGGCGGATTTGCTGCCTCGGAAGTTCTTGTCGGAACAGAACCAACATGACTGGGGGGTGATGTATAGGAAGATTAAGAACATGGGTGTGTTCAAGTCTGGTGAAGGATTTCTCAAAGAAGTGCCTCTTCAGGATGTGAGGTTGCATAAGGATTCAATCCATGCTAGAGCACAGCAAACAAATTTGGAGTATCTGTTGATGTTGGATGTGGACAGCTTGATTTGGAGCTTCAGGAAGACAGCTGGTCTATCCACACCTGGGACTCCTTATGGAGGGTGGGAAGGTCCAGAAGTTGAACTCAGGGGTCATTTTGTTGGGCATTACTTGAGTGCATCAGCTCTAATGTGGGCCAGCACACAGAATGATACCCTGAAGCAGAAAATGTCATCTCTTGTTGCTGGTCTGTCTGCCTGTCAGGAGAAAATTGGAACCGGGTATCTATCTGCATTTCCGTCTGAGTTTTTTGATCGATTTGAAACTGTCCAACCTGTTTGGGCCCCCTATTATACCATTCACAAGATCTTGGCTGGCCTCTTGGATCAACATACTTTTGCTGGAAACCCTCAAGCTCTAAAAATGGTAACATGGATGGTTGATTACTTCTACAACAGAGTGCAGAATGTAATAACAAAGTACACTGTAAATAGGCATTATGAATCACTGAATGAGGAAACTGGAGGGATGAATGATGTCCTTTACAGATTATACAGCATAACGGGAGATTCTAAGCACCTAGTGTTGGCTCACCTTTTTGACAAGCCATGCTTTTTAGGGTTGCTTGCAATGCAGGCTAATGACATAGCTAATTTTCATGCCAATACACATATCCCAGTTGTTGTTGGATCTCAAATGCGGTATGAAATCACAGGCGATCCACTGTATAAGCAAATTGGGACATTCTTTATGGACCTCGTAAACTCTTCTCACAGCTATGCAACTGGAGGGACATCAGTCAGCGAGTTCTGGAGTGATCCAAAGAGAATAGCAGACAACTTAAGAACGACAGAGAATGAAGAATCATGCACAACTTATAATATGTTGAAGGTTTCGCGCCACCTGTTTAGATGGACCAAAGAAGTCTCTTATGCAGACTATTACGAGCGCGCCTTAACCAATGGTGTGCTCAGCATTCAAAGAGGAACAGATCCTGGAGTGATGATTTATATGCTTCCACTAGGCTTTGCGGTTTCAAAGGCTAGAACTGGACATAGTTGGGGAACACAATTTGACTCTTTCTGGTGTTGCTATGGAACAGGAATTGAATCATTCTCAAAGCTGGGGGATTCTATCTATTTTGAGGAGGAAGGAAAAGATCCCACACTTTACATCATTCAGTACATACCAAGCTCATTTAATTGGAAATCAGGCAAAATTTTGCTCAATCAGACAGTTGTTCCAGTTGCTTCATCGGATCCTTACCTACGTGTGACATTTACGTTTTCTCCTGTTGAGAATACTTTGTCTACATTGAACTTTCGACTACCAAGTTGGACTCTTCTGGATGGCGCCAAGGGGATATTAAATGGTCAAACTTTATCCCTGCCAAATCCAGGAAAGTATTTGTCAGTCACAAGGCAATGGAGTGGTAGTGACAAGCTGACCCTTCAGCTGCCCCTTACCGTAAGGACAGAGGCCATAAAAGATGACAGGCCTGAATATGCATCTGTTCAAGCAATTCTTTATGGTCCTTATCTTCTTGCTGGTCATACAACCGGTGGTGATTGGGACCTTAAAGCTGGGGCTAACAATGCAGACTGGATTACTCCTATTCCTGCCAGTTACAATAGTCAACTAGTTTCTTTTTTCCGAGACTTTGAAGGATCAACTTTTGTCTTGACAAATTCAAACAAATCAGTTTCAATGCAAAAATTGCCTGAATATGGCACTGATTTGACTCTTCAGGCAACCTTTAGGATTGTCCTAAAAGATTCTTCCTCAAAATTTTCAACATTAGCAGATGCTAATGATAGATCAGTGATGTTAGAACCATTTGATTTTCCTGGAATGAATGTGATTCACCAAGGAGCAGGCAAACCTCTTCTCATTGCAGATTCTTCTCATGGCGGGCCATCTTCTGTTTTCCTTTTGGTACCAGGATTGGATGGACGAAATGAAACTGTATCTTTAGAATCCCAGAGCAACAAAGGCTGTTATGTGTACAGTGGTATGAGCCCTAGTTCAGGAGTCAAGCTCAGTTGCAAATCTGATTCTGATGCTACTTTTAACAAAGCAACAAGCTTTGTTGCTCTGCAAGGATTGAGCCAATACAATCCTATCAGTTTTGTGGCTAAAGGCACGAACAGGAATTTTCTTTTGCAGCCATTACTCTCATTCAGAGATGAGCATTACACAGTTTATTTCAATATTCAAGATTGA 2613 0.4237 MSIFATSMPVLSIVHPRRMEAFVFVFVAILLCGCVAAKECTNIPTQSHTFRYELLMSKNATWKAEVMDHYHLTPTDETVWADLLPRKFLSEQNQHDWGVMYRKIKNMGVFKSGEGFLKEVPLQDVRLHKDSIHARAQQTNLEYLLMLDVDSLIWSFRKTAGLSTPGTPYGGWEGPEVELRGHFVGHYLSASALMWASTQNDTLKQKMSSLVAGLSACQEKIGTGYLSAFPSEFFDRFETVQPVWAPYYTIHKILAGLLDQHTFAGNPQALKMVTWMVDYFYNRVQNVITKYTVNRHYESLNEETGGMNDVLYRLYSITGDSKHLVLAHLFDKPCFLGLLAMQANDIANFHANTHIPVVVGSQMRYEITGDPLYKQIGTFFMDLVNSSHSYATGGTSVSEFWSDPKRIADNLRTTENEESCTTYNMLKVSRHLFRWTKEVSYADYYERALTNGVLSIQRGTDPGVMIYMLPLGFAVSKARTGHSWGTQFDSFWCCYGTGIESFSKLGDSIYFEEEGKDPTLYIIQYIPSSFNWKSGKILLNQTVVPVASSDPYLRVTFTFSPVENTLSTLNFRLPSWTLLDGAKGILNGQTLSLPNPGKYLSVTRQWSGSDKLTLQLPLTVRTEAIKDDRPEYASVQAILYGPYLLAGHTTGGDWDLKAGANNADWITPIPASYNSQLVSFFRDFEGSTFVLTNSNKSVSMQKLPEYGTDLTLQATFRIVLKDSSSKFSTLADANDRSVMLEPFDFPGMNVIHQGAGKPLLIADSSHGGPSSVFLLVPGLDGRNETVSLESQSNKGCYVYSGMSPSSGVKLSCKSDSDATFNKATSFVALQGLSQYNPISFVAKGTNRNFLLQPLLSFRDEHYTVYFNIQD* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1120 870 PANTHER PROLINE-TRNA LIGASE (DUF1680) 25 869 - -
Gso11g1120 870 SUPERFAMILY AbfB domain 768 850 IPR036195 GO:0046373|GO:0046556
Gso11g1120 870 Gene3D - 730 858 - -
Gso11g1120 870 SUPERFAMILY Six-hairpin glycosidases 166 456 IPR008928 GO:0005975
Gso11g1120 870 PANTHER - 25 869 - -
Gso11g1120 870 Pfam Beta-L-arabinofuranosidase, GH127 125 646 IPR012878 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1120 Gso-Chr11 10077010 10083882 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1120 K09955 - gmx:100781521 1776.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1120 11 10077010 10083882 Gso11g1120 11 10077010 10083882 ECH
Gso12g0465 12 4100852 4107687 Gso11g1120 11 10077010 10083882 GST
Gso15g0292 15 2662220 2666486 Gso11g1120 11 10077010 10083882 PCT