Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0266 ATGGCGTTGAACAATGGCGTCCCCGCCACTGGCACCGGCCTCATCGTTAGCTTCGGCGAGATGCTCATCGACTTCGTCCCCACCGTCTCCGGCGTGTCCCTGGCCGAGGCCCCTGGCTTCCTCAAGGCCCCCGGCGGCGCCCCAGCCAACGTCGCCATCGCCGTGGCGCGACTCGGCGGCAAAGCCGCCTTCGTCGGCAAACTCGGGGACGACGAGTTCGGCCACATGCTCGCCGGAATCCTCAAGGAGAACGGTGTCCGCGCCGACGGCATCACCTTCGACCAGGGTGCACGCACCGCGCTGGCCTTCGTGACCCTACGCGCCGACGGGGAGCGTGAGTTCATGTTCTACCGGAACCCCAGCGCCGACATGCTCCTCAAGCCCGAAGAACTCAACCTCGAACTCATCAGATCTGCAAAAGTTTTCCATTATGGATCAATAAGTTTGATCGTGGAGCCATGCAGATCAGCACACTTGAAGGCAATGGAAGTTGCCAAGGAAGCTGGGTGCCTGCTCTCCTATGACCCCAACCTTCGGCTACCATTGTGGCCTTCGCCTGAGGAAGCTCGTAAGCAAATACTCAGCATTTGGGAGAAGGCTGATTTGATCAAGGTCAGTGATGTGGAGCTTGAGTTCCTCACCGGAAGTGACAAGATTGATGATGAATCTGCTTTGTCATTGTGGCACCCCAATTTGAAGTTGCTCCTTGTCACTCTTGGAGAACATGGTTCCAGATACTACACCGAGAATTTCAAAGGATCAGTAGATGCTTTTCATGTTAATACAGTTGATACAACTGGTGCCGGTGATTCCTTTGTTGGTGCTCTATTGTCCAAGATTGTCGATGATCAGTCCATTCTTGAAGATGAACCAAGGTTAAGAGAAGTACTCAAGTATGCAAATGCATGTGGAGCAATTACAACTACCCAAAAGGGAGCAATTCCCGCCCTTCCCAAAGAGGAGGATGCACTGAAACTGATCAAAGGCGCATAG 993 0.5408 MALNNGVPATGTGLIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVARLGGKAAFVGKLGDDEFGHMLAGILKENGVRADGITFDQGARTALAFVTLRADGEREFMFYRNPSADMLLKPEELNLELIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGCLLSYDPNLRLPLWPSPEEARKQILSIWEKADLIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGSRYYTENFKGSVDAFHVNTVDTTGAGDSFVGALLSKIVDDQSILEDEPRLREVLKYANACGAITTTQKGAIPALPKEEDALKLIKGA* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0266 330 SUPERFAMILY Ribokinase-like 15 326 IPR029056 -
Gso15g0266 330 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 45 69 IPR002173 GO:0016773
Gso15g0266 330 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 264 277 IPR002173 GO:0016773
Gso15g0266 330 PRINTS Ribokinase signature 40 59 IPR002139 GO:0016301
Gso15g0266 330 PRINTS Ribokinase signature 195 210 IPR002139 GO:0016301
Gso15g0266 330 PRINTS Ribokinase signature 235 246 IPR002139 GO:0016301
Gso15g0266 330 Gene3D - 13 330 IPR029056 -
Gso15g0266 330 PANTHER BNAA04G18320D PROTEIN 20 319 - -
Gso15g0266 330 Pfam pfkB family carbohydrate kinase 14 319 IPR011611 -
Gso15g0266 330 PANTHER HEXOKINASE FAMILY MEMBER 20 319 - -
Gso15g0266 330 CDD bac_FRK 14 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0266 Gso-Chr15 2414059 2417853 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0266 K00847 - gmx:100803713 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0266 15 2414059 2417853 Gso11g3542 11 51217057 51220916 GST
Gso15g0266 15 2414059 2417853 Gso12g0431 12 3753603 3757679 PCT
Gso15g0266 15 2414059 2417853 Gso11g1083 11 9679043 9684155 PCT
Gso12g0431 12 3753603 3757679 Gso15g0266 15 2414059 2417853 PCT
Gso11g1083 11 9679043 9684155 Gso15g0266 15 2414059 2417853 PCT