Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1083 ATGGCTTCCTCCACCAACGCTCTTCCTCCCACCGGCAACGGCCTCATCGTGAGCTTCGGCGAGATGCTCATCGATTTCGTCCCCACCGTCTCCGGCGTGTCCCTTGCGGAGGCTCCGGGCTTCCTCAAGGCCCCCGGCGGCGCCCCCGCCAACGTCGCCATCGCCGTCGCGAGGCTCGGCGGAAAGGCGGCGTTCGTCGGAAAGCTCGGCGACGACGAGTTCGGGCACATGCTGGCTGGAATCCTGAAGGAGAACGACGTGCGATCCGACGGGATCAACTTCGACCAGGGCGCGCGCACCGCGCTGGCGTTCGTGACCCTACGCGCCGACGGAGAGCGTGAGTTCATGTTCTACAGAAACCCCAGCGCCGACATGCTCCTCACGCCCGAAGATCTCAATCTCGAACTCATCAGATCTGCAAAAGTATTCCATTATGGATCGATAAGCTTGATCGTGGAGCCATGCAGATCAGCACACCTGAAGGCAATGGAAGTTGCCAGGGAAGCAGGATGCTTGCTCTCTTATGACCCAAACCTGCGGCTACCCTTGTGGCCCTCCGCCGAGGAAGCACGTCAGCAAATACTCAGCATATGGGACAAGGCTGATGTAATCAAGGTCAGTGATGTGGAACTGGAATTCCTAACCGGAAGTGACAAAATTGATGATGCATCTGCTCTCTCCCTGTGGCACCCCAATTTGAAGTTGCTCCTTGTCACTCTTGGCGAACATGGCTCTAGATACTATACCAAGAATTTCCATGGATCAGTGGAGGCTTTTCATGTCAGCACGGTCGACACAACTGGCGCTGGTGATTCCTTTGTTGGTGCTCTATTAAGCAAGATTGTCGATGATCAATCCGTACTTGAAGATGAAGCAAGGTTAAGGGAAGTACTCAAGTTTGCAAATGCGTGTGGAGCAATTACAACTACTAAAAAGGGAGCAATTCCTGCTCTTCCCACAGAGGCTGATGCCCTCAACCTGATCAAAGAGGCATAG 996 0.5482 MASSTNALPPTGNGLIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVARLGGKAAFVGKLGDDEFGHMLAGILKENDVRSDGINFDQGARTALAFVTLRADGEREFMFYRNPSADMLLTPEDLNLELIRSAKVFHYGSISLIVEPCRSAHLKAMEVAREAGCLLSYDPNLRLPLWPSAEEARQQILSIWDKADVIKVSDVELEFLTGSDKIDDASALSLWHPNLKLLLVTLGEHGSRYYTKNFHGSVEAFHVSTVDTTGAGDSFVGALLSKIVDDQSVLEDEARLREVLKFANACGAITTTKKGAIPALPTEADALNLIKEA* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1083 331 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 46 70 IPR002173 GO:0016773
Gso11g1083 331 Gene3D - 14 331 IPR029056 -
Gso11g1083 331 PANTHER BNAA04G18320D PROTEIN 20 325 - -
Gso11g1083 331 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 265 278 IPR002173 GO:0016773
Gso11g1083 331 Pfam pfkB family carbohydrate kinase 15 320 IPR011611 -
Gso11g1083 331 PRINTS Ribokinase signature 41 60 IPR002139 GO:0016301
Gso11g1083 331 PRINTS Ribokinase signature 196 211 IPR002139 GO:0016301
Gso11g1083 331 PRINTS Ribokinase signature 236 247 IPR002139 GO:0016301
Gso11g1083 331 CDD bac_FRK 15 315 - -
Gso11g1083 331 SUPERFAMILY Ribokinase-like 16 327 IPR029056 -
Gso11g1083 331 PANTHER HEXOKINASE FAMILY MEMBER 20 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1083 Gso-Chr11 9679043 9684155 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1083 K00847 - gmx:100780082 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1083 11 9679043 9684155 Gso11g1083 11 9679043 9684155 ECH
Gso12g0431 12 3753603 3757679 Gso11g1083 11 9679043 9684155 GST
Gso15g0266 15 2414059 2417853 Gso11g1083 11 9679043 9684155 PCT
Gso11g3542 11 51217057 51220916 Gso11g1083 11 9679043 9684155 PCT
Gso11g1083 11 9679043 9684155 Gso15g0266 15 2414059 2417853 PCT
Gso11g1083 11 9679043 9684155 Gso11g3542 11 51217057 51220916 PCT