Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1209 ATGCCACCTTCCCCTTCTTTCCCTTCAGAGAACCGAACAAAATGGAGGAAGAGGCGGAAGAGAGAATCCTACAAACGCAACCAGAAGCGTCACGGCGACGACGACGACTCCGACGATGACAACGAGCCCGACGACGATGACTCCGACGACCAATTCCGCAGCCCTAGCGCCCAACTCGCGGACCCGCGGCGCGTGGATATCGAGGTCGTGTCGCCCGAGGGGGTCCAGATTTCGCGGTTCCCGCCGGCGATCAGGCGCGAGGTGACCCGCCCCCACGCGGTGGTCGTGGCAATCGCAGCGCTGGAGGTCGGCGACGACAAATCACATCACAACAACGTTCCGGTTCTGGAGAATGTGTCGCACGGCCAGCTCCAGGTGCTGTCGGCGGTGTCCACCGATTGCCTCGGCGGCGGCTCGAGCTTCGTCGTTGCTCCACCGCCAGTTTCGAAAGGCTCCGGCGTGGTTAAGCGGTTCGGGAGTAGGGTTCTTGTTGTTCCTATGCATTCAGATTGGTTTTCTCCAGCCTCAGTGCATCGACTTGAGAGACAAGCAGTGCCTCATTTCTTCTCAGGAAAGTTGCCAGATCATACACCAGATAAGTATGTGGAATGTAGGAACTACATTGTTGCAAGATACATGGAAGAGCCAGGGAAGAGGATTACAGTCTCTAGTTGCCAGGGATTGTTGGTTGGTGTTGGTAATGAAGATTTAACTCGAATTGTCAGGTTCCTTGATCACTGGGGAATTATCAATTACTGTGCTCAGGGCCCAAGTTGTGAGAATTCGGACAATGAGACTTACCTGAAGGAGGACACAAGTGGTGCAATATGTGTGCCATCAACAGCTTTAAGATCCATAGATAGTTTGGTTGAATTTGACAGGCCCAAGTGTAAATTCAAAGCAGATGAAATTTATTCATCTCGAACAATGCACAATACTGATATTTCTGATTTGGATGACAGAATAAGAGAGCATCTATCTGAAAACCATTGCCATTATTGTTCTCGTTCTCTTCCTATTGTATACTACCAATCACAAAAAGAGGTTGATATTTTACTCTGCACTGATTGCTTTCATGATGGGAGATTTGTCACTGGTCATTCTAGTATAGATTTTATAAGGGTGGATTCAACTACAGATTATGGTGATCTAGATGGGGATAGTTGGACTGATCAAGAGACTTTGCTGCTGCTTGAAGCAGTGGAGGTTTACAATGAGAATTGGAATGAAATTGCTGAGCATGTTGGCACCAAGTCGAAAGCGCAATGCATTCTTCATTTTCTCCGTTTACCTGTAGAAGATGGAAAGTTGGAAAATATCAATGTTTCAAGTTTGTCTTTGTTATCCAATGTGAAGAATCAAGAGGATATTGGAAGATTGCATTGTTTCTCAAATGGAGATTCTTCAGGACCTGTGCATAACAGCCAAGATTCTGATGGCAGGCTTCCTTTCACAAATTCTGGAAATCCAGTTATGGCACTGGTTGCCTTTTTAGCCTCTGCTGTTGGACCAAGAGTAGCTGCAACTTGTGCTCATGCAGCTTTAGCTTCATTGTCAGGGAATAATTCTGGGAGCACGGCACATATAGAAGCAGTGGAAAATGATAATCGGACAAATTCAGAAAGTATACATAATAGAGATGGTGGCCATGATGGAGAGGTTGCAAATTCAAATCAGAAAAATAAGGACATGTCAAAAGTACTTGGTTCATGTGGTCAACATGAGGGAGGGTCAATCCTCCTATCTGCTGAGAAAGTCAAAGATGCTGCCAAAGCAGGCCTATCCGCTGCAGCAATGAAAGCTAAATTGTTTGCTGATCATGAAGAGCGAGAAATTCAGAGGCTATGTGCTAATATTGTTAATAATAAGTTGAAAAGATTGGAACTGAAGCTGAAGCAGTTTGCAGAAATTGAAACACAGCTGATGAGAGAATGTGAACAAGTTGAGAAGGTGAGGCAGAGGTTGGCTTCTGAACGGTCCCATATTATATCAACTCGTCTGGGAAATGGTGGAACCACTCCAATGAATATAGCAGGTGTTGGTCCATCCACGATTAACAATAATAGCAATGGTAGGCAACAAATGATTTCCGCTTCTTCCTCACAGCCTAGCATCTCAGGGTATGGCAATAGCCAACGAGTTCATCCACACATGTCCTTCGTCCCACGGCCTTCAGTGTTTGGGTTGGGGCAAAGGTTGCCACTTTCTATGATACAACAACCACAATCAACTTCTTCAAATCCGATGGTCAATGGCCCCAGTAATTTGCAGCCTTCTCCCAATCATTCGATGTCGAGGCCGGTGTCAAGGACTAACTCTGATTTAGGTTAA 2331 0.4607 MPPSPSFPSENRTKWRKRRKRESYKRNQKRHGDDDDSDDDNEPDDDDSDDQFRSPSAQLADPRRVDIEVVSPEGVQISRFPPAIRREVTRPHAVVVAIAALEVGDDKSHHNNVPVLENVSHGQLQVLSAVSTDCLGGGSSFVVAPPPVSKGSGVVKRFGSRVLVVPMHSDWFSPASVHRLERQAVPHFFSGKLPDHTPDKYVECRNYIVARYMEEPGKRITVSSCQGLLVGVGNEDLTRIVRFLDHWGIINYCAQGPSCENSDNETYLKEDTSGAICVPSTALRSIDSLVEFDRPKCKFKADEIYSSRTMHNTDISDLDDRIREHLSENHCHYCSRSLPIVYYQSQKEVDILLCTDCFHDGRFVTGHSSIDFIRVDSTTDYGDLDGDSWTDQETLLLLEAVEVYNENWNEIAEHVGTKSKAQCILHFLRLPVEDGKLENINVSSLSLLSNVKNQEDIGRLHCFSNGDSSGPVHNSQDSDGRLPFTNSGNPVMALVAFLASAVGPRVAATCAHAALASLSGNNSGSTAHIEAVENDNRTNSESIHNRDGGHDGEVANSNQKNKDMSKVLGSCGQHEGGSILLSAEKVKDAAKAGLSAAAMKAKLFADHEEREIQRLCANIVNNKLKRLELKLKQFAEIETQLMRECEQVEKVRQRLASERSHIISTRLGNGGTTPMNIAGVGPSTINNNSNGRQQMISASSSQPSISGYGNSQRVHPHMSFVPRPSVFGLGQRLPLSMIQQPQSTSSNPMVNGPSNLQPSPNHSMSRPVSRTNSDLG* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1209 776 MobiDBLite consensus disorder prediction 1 67 - -
Gso14g1209 776 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3C 58 773 - -
Gso14g1209 776 Pfam Myb-like DNA-binding domain 388 430 IPR001005 -
Gso14g1209 776 ProSiteProfiles Myb-like domain profile. 381 431 IPR001005 -
Gso14g1209 776 PANTHER SWI/SNF COMPLEX-RELATED 58 773 - -
Gso14g1209 776 Pfam SWIRM-associated region 1 592 666 IPR032451 -
Gso14g1209 776 Gene3D - 385 435 - -
Gso14g1209 776 Gene3D - 169 256 IPR036388 -
Gso14g1209 776 MobiDBLite consensus disorder prediction 534 558 - -
Gso14g1209 776 CDD SANT 388 430 IPR001005 -
Gso14g1209 776 SUPERFAMILY Homeodomain-like 386 439 IPR009057 -
Gso14g1209 776 SMART sant 385 433 IPR001005 -
Gso14g1209 776 MobiDBLite consensus disorder prediction 690 709 - -
Gso14g1209 776 ProSiteProfiles Zinc finger ZZ-type profile. 326 380 IPR000433 GO:0008270
Gso14g1209 776 ProSiteProfiles SWIRM domain profile. 163 261 IPR007526 GO:0005515
Gso14g1209 776 ProSiteProfiles SANT domain profile. 384 435 IPR017884 -
Gso14g1209 776 SUPERFAMILY Homeodomain-like 162 255 IPR009057 -
Gso14g1209 776 MobiDBLite consensus disorder prediction 739 776 - -
Gso14g1209 776 Coils Coil 617 658 - -
Gso14g1209 776 Pfam SWIRM domain 166 252 IPR007526 GO:0005515
Gso14g1209 776 MobiDBLite consensus disorder prediction 534 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1209 Gso-Chr14 28436376 28442169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1209 331 427 EF-hand Containing Proteins AT3G07740 33.019 4.22e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1209 K11649 - gmx:100792929 1499.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1209 14 28436376 28442169 Gso13g0157 13 10150357 10156249 GST
Gso14g1209 14 28436376 28442169 Gso4g2065 4 51073772 51080967 PCT
Gso14g1209 14 28436376 28442169 Gso6g0981 6 9472073 9478383 PCT
Gso4g2065 4 51073772 51080967 Gso14g1209 14 28436376 28442169 PCT
Gso6g0981 6 9472073 9478383 Gso14g1209 14 28436376 28442169 PCT