Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0901 ATGATTTTATCTTTGGCAATGTCTCCTGATGGCCTCAATTTGGCATCTGGTGATGAAGACGGCACAATCATGATTTGGGACCTCTCTAGTGGCTGTTGCATCACGCCTTTAGTTGGTCACACCTCATGTGTCTGGTCACTCACTTTCAGTTGTGAAGGTTCTCTTCTAGCATCTGGATCCGCGGATTGCACTGTCAAGTTTGGGGATGTAACTACAGAAGTGGGAATACTAACAGACTCAGATCATCGAAAAGCCTGCCTACCAAATCTGCTTCAGTTTACTCTCTCCAGTTTTCTAGAAGGAATCTTCTTTTTGCAGCTGGAGCTATTGCAAAAAGTGGCTGATAGTGTGTCTTCAAATTTCAAAGTGACAATTCTGACTTGA 384 0.4349 MILSLAMSPDGLNLASGDEDGTIMIWDLSSGCCITPLVGHTSCVWSLTFSCEGSLLASGSADCTVKFGDVTTEVGILTDSDHRKACLPNLLQFTLSSFLEGIFFLQLELLQKVADSVSSNFKVTILT* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0901 127 ProSitePatterns Trp-Asp (WD) repeats signature. 14 28 IPR019775 -
Gso14g0901 127 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1 31 - -
Gso14g0901 127 ProSiteProfiles Trp-Asp (WD) repeats profile. 37 78 IPR001680 GO:0005515
Gso14g0901 127 Gene3D - 1 89 IPR015943 GO:0005515
Gso14g0901 127 SMART WD40_4 1 27 IPR001680 GO:0005515
Gso14g0901 127 SMART WD40_4 30 69 IPR001680 GO:0005515
Gso14g0901 127 ProSiteProfiles Trp-Asp (WD) repeats profile. 1 36 IPR001680 GO:0005515
Gso14g0901 127 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 1 91 IPR037783 -
Gso14g0901 127 Pfam WD domain, G-beta repeat 2 27 IPR001680 GO:0005515
Gso14g0901 127 Pfam WD domain, G-beta repeat 31 67 IPR001680 GO:0005515
Gso14g0901 127 SUPERFAMILY WD40 repeat-like 2 85 IPR036322 GO:0005515
Gso14g0901 127 PANTHER CANNONBALL-RELATED 1 91 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0901 14 94 Miscellaneous Gene Families AT5G08390 35.802 2.09e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0901 K03130 - gmx:102662777 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0901 14 10791214 10806021 Gso17g1881 17 37660051 37680462 GST
Gso14g0901 14 10791214 10806021 Gso4g0525 4 5008363 5018140 PCT
Gso14g0901 14 10791214 10806021 Gso6g0520 6 4750965 4758289 PCT
Gso4g0525 4 5008363 5018140 Gso14g0901 14 10791214 10806021 PCT
Gso6g0520 6 4750965 4758289 Gso14g0901 14 10791214 10806021 PCT