Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0893 ATGAAGTTTATGAAGTTGGGTTCGAAGCCTGATGCTCTTCAAAGTGATGAAAAATCTATCAGGTATATATCATCTGAATTGGTTACAGATATTATCATAACTGTTGGTGAAGTTAAGTTTCACCTGCACAAGTTCCCTCTACTGTCCAAGAGTAATCGTTTACAAAAGTTGCTGTCAAAGGCTAATGAAGAGAATGCTGATGAAATTCAATTGGATGATTTTCCTGGTGGTCCCAAGGCTTTTGAAATATGTGCAAAGTTCTGCTATGGAATGACTGTTACTCTTAATGCTTACAATGTTGTGGCTGCTCGTTGTGCCGCTGAGTACCTTGAGATGACTGAGGATATTGATAGAGGGAACTTAATTTTCAAAATTGAGGTGTTTCTTACCTCAAGTATCTTTCGCAGCTGGAAGGATTCTATAATTGTTCTCCAAACTACTAAATCTCTTTTGCCATGGTCTGAGGACTTAAAGATTGTTGGGAGATGTATCGATTCCATAGCTTCTAAAACTTCTGTGGATCCAGCAAACATCACTTGGTCTTACACTTATAACCGTAAGTTATCAGAGCTTGATAAAATTGTTGAGGACAAGATAACACCACAAGAGAAAATTGAGCCTGTTCCTAAGGAATGGTGGGTTGAAGATATATGTGAACTGGACATTGATCTTTATAAACGGGTAATGATTACTGTCAAGTCAAAGGGAAGAATGGACGGAGTTGTGATCGGCGAGGCACTAAAAATCTATGCTGTAAGATGGTTGCCTGATTCTGTTGATGCATTGGTTTCGGATGCCCATGCCTGGAGGAACAAATCTCTGGTAGAAACAATTGTCTGTTTATTGCCGTGCGATAATGGCGTGGGTTGTTCATGTAGTTTCTTGCTGAAGCTATTGAAAGTGGCCATATTGGTTGAAGCTGATGAGTCTTCAAGGGGACAATTGATGAAGAGCATTGGCCTAAAATTTCATGAAGCTTCTGTCAAAGATTTACTAATTCCAGCAAGGTTTCCCCAGAATACCAAATATGATGTTGATTTGGTGCAAGATCTTTTGAATATATACAAGACTAACATAAAGGGAAGCTGTGATGTGGAGGTTGAGGAGAAGAAAGATAAAGCAAATGATGAGTCTATTTTAGGACAGATGTCTTTATTGAATGTTGGCAAGTTGGTAGATGGGTATCTTGGAGAAATTGCGCATGATCCAAATCTCAGCCTCTCTAGTTTTGTTGATCTGTCACAGTCAATTCCAGAGTTTGCTAGACCAAATCATGATGGCCTGTACAGAGCTATAGACATCTACTTGAAGGAGCACCCAAGTTTGACAAAAGCTGAAAGGAAAAAGATATGTGGACTAATGGATGTCAAGAAATTGACAGTGGAAGCATCAATGCATGCTGCACAGAACGAACGCCTTCCTCTTCGAGTTGTGGTCCAGGTTCTCTATTTTGAGCAGGTCAGAGCTGCTTCCAATGCTCGCACACTTGGTAACAGTCCACGCAATTCTACAAACACTCATGTCAACGGAGACAAAGAGTGTGAGAAATCGAGGGGAGAAAGCTGCCAATCCCTCAACAACCAAATGTGTCACATGAAGGTTAGAGACAAAGAGTTCCACAAGAATGGAAAATTGAACAAGAGTAGCAAGAACAGCAGAAGTGGCATGCAGTTGTTGCCATCTGGGTCAAGGAGAATTTTTGACAAGTTATGGATTGTGGGGAAAGGACAAGGAGAAAATAGGAGCTCAGAGACTTCAGGGAGTTCCAATAGCCCTACTTCTGTAGTCCCTGGAGATACCAAATCATCTGGTTCATCATTGCGACACAGGAGGCTTTCCATCTCTTAG 1848 0.4085 MKFMKLGSKPDALQSDEKSIRYISSELVTDIIITVGEVKFHLHKFPLLSKSNRLQKLLSKANEENADEIQLDDFPGGPKAFEICAKFCYGMTVTLNAYNVVAARCAAEYLEMTEDIDRGNLIFKIEVFLTSSIFRSWKDSIIVLQTTKSLLPWSEDLKIVGRCIDSIASKTSVDPANITWSYTYNRKLSELDKIVEDKITPQEKIEPVPKEWWVEDICELDIDLYKRVMITVKSKGRMDGVVIGEALKIYAVRWLPDSVDALVSDAHAWRNKSLVETIVCLLPCDNGVGCSCSFLLKLLKVAILVEADESSRGQLMKSIGLKFHEASVKDLLIPARFPQNTKYDVDLVQDLLNIYKTNIKGSCDVEVEEKKDKANDESILGQMSLLNVGKLVDGYLGEIAHDPNLSLSSFVDLSQSIPEFARPNHDGLYRAIDIYLKEHPSLTKAERKKICGLMDVKKLTVEASMHAAQNERLPLRVVVQVLYFEQVRAASNARTLGNSPRNSTNTHVNGDKECEKSRGESCQSLNNQMCHMKVRDKEFHKNGKLNKSSKNSRSGMQLLPSGSRRIFDKLWIVGKGQGENRSSETSGSSNSPTSVVPGDTKSSGSSLRHRRLSIS* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0893 615 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 4 603 IPR029961 GO:0060918|GO:0099402
Gso14g0893 615 MobiDBLite consensus disorder prediction 494 520 - -
Gso14g0893 615 Pfam BTB/POZ domain 25 116 IPR000210 GO:0005515
Gso14g0893 615 Gene3D Potassium Channel Kv1.1; Chain A 7 118 IPR011333 -
Gso14g0893 615 ProSiteProfiles NPH3 domain profile. 211 488 IPR027356 -
Gso14g0893 615 PANTHER OS12G0117600 PROTEIN 4 603 IPR043454 -
Gso14g0893 615 SMART BTB_4 29 127 IPR000210 GO:0005515
Gso14g0893 615 MobiDBLite consensus disorder prediction 578 615 - -
Gso14g0893 615 MobiDBLite consensus disorder prediction 533 559 - -
Gso14g0893 615 SUPERFAMILY POZ domain 22 115 IPR011333 -
Gso14g0893 615 CDD BTB_POZ_NPY3-like 21 124 - -
Gso14g0893 615 Pfam NPH3 family 211 464 IPR027356 -
Gso14g0893 615 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Gso14g0893 615 MobiDBLite consensus disorder prediction 577 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0893 Gso-Chr14 10531910 10537209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0893 22 487 EF-hand Containing Proteins AT3G44820 34.077 6.09e-92 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0893 - - gmx:100790291 1178.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0893 14 10531910 10537209 Gso14g0893 14 10531910 10537209 ECH
Gso14g0893 14 10531910 10537209 Gso17g1888 17 37773086 37778596 GST
Gso14g0893 14 10531910 10537209 Gso4g0517 4 4939169 4943893 PCT
Gso14g0893 14 10531910 10537209 Gso6g0513 6 4681511 4686203 PCT
Gso4g0517 4 4939169 4943893 Gso14g0893 14 10531910 10537209 PCT
Gso6g0513 6 4681511 4686203 Gso14g0893 14 10531910 10537209 PCT