Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0519 ATGTGTGTCTCCCTCTCGTATAAATACACTACCATCTTCCATTTCCTCTCCAAATCCAATTCACCAAACATGGTTGATCTAGATTGGCAAACAAAGATGGTTCACTCCAACATGCCTCCAAAGTCCCCCAAACTCTCTCTCCCGGATAATAACATTCCAATCCCCCTTCGCCAAAACGACATCACCGCAGCGTCGTCTCCAATCTGCGCTGCCTACGACAACTACCTCCGCCTCCCTGAGCTCAGAGCCCTCTGGGCCTCCAACGACTTCCCTAATTGGGCCAACGAGCCCATCTTAAAGCCCACCTTACACGCCCTCGAAATCACCTTCCGCTTACTCGCAACCGTTTTATCCGACCCGAGGCCGTACATAAACAAGCGCGAGTGGACCCGGCGGGTGGAGTCTCTCGCCACGGCCCAAATTCAGATCATAGCTATGCTGTGTGAAGACGAAGAAGAAAACCCCGAGACACGTGGCACGACGCCACCGGTGAGTGACATTAACGGCTTTATCGCTCAAAGCAGAAGCTACAGCGAGGAGAGCCTGCTCCCGCGCCTCGCCACGTGGCACAAATCCAAGGACGTGGCGCGGAGAATCCTCGATTCGGTAGAGTACCAGATGATGAGGTGCACGTACACCTTAGGTTTAGGAGAGGCGAATCTCGCGGGTAAGAAGATATTCCTTTACGACGCCGTTTGCAGGCCGAGCGAGATTCACTCGTTGGAGACGACGCCGTTTGATTACGTGGGGAACTGCGAGAACAAGACGCTGCACGCGACGCAGCAGATCGCGGAGTGTTGGACGCGCGCGGTGAGGAAGCTGCTGGAGAGAGTGGCGGAGTCGGTGGAGAGAAAAACGTTGGAGAAGGCGGCGAGGGAGTGTCACGCGGTGGAGCGGATCTGGAAGTTGTTAACGGAGGTTGAGGACGTGCACGTGATGATGGATCCGGAGGATTTCTTGAGGTTGAAGAAGGAGTTGGGGATGATGAGAAATTGCGGGGAAATGGTGGCGTTTTGCTTCAGGTCGAGGGAGCTCGTGGAGGTGGCGAGGATGTGTAGGGATCTGAGGCAGAAGGTGCCGGAGATATTGGAGGTGGAGGTGGACCCCACGGGTGGGCCCGGGATGATGGAGGCGGCGATGAAGGTTTACTCGGAGAAAGAGAAAAGGAACGGGTTCGAGAAGGTTCATGTTTTGCAGGGGATGCAGGCGATTGAGGTGGCGATGAAGAGGTTCTTCTACGCCTATAAGCAGGTTGTGGCGGTTATGATGGGGAGCTCCGAGGCCGATAATGGGTTCACTCAGATATTCCTTGAACCCACTTATTTCCCTAGCTTAGATGCTGCCAAGACCTTTCTCGCTTATTATTGGGAAAATAATAATCAAAATGTGGTTCCCTGCTAG 1401 0.5403 MCVSLSYKYTTIFHFLSKSNSPNMVDLDWQTKMVHSNMPPKSPKLSLPDNNIPIPLRQNDITAASSPICAAYDNYLRLPELRALWASNDFPNWANEPILKPTLHALEITFRLLATVLSDPRPYINKREWTRRVESLATAQIQIIAMLCEDEEENPETRGTTPPVSDINGFIAQSRSYSEESLLPRLATWHKSKDVARRILDSVEYQMMRCTYTLGLGEANLAGKKIFLYDAVCRPSEIHSLETTPFDYVGNCENKTLHATQQIAECWTRAVRKLLERVAESVERKTLEKAARECHAVERIWKLLTEVEDVHVMMDPEDFLRLKKELGMMRNCGEMVAFCFRSRELVEVARMCRDLRQKVPEILEVEVDPTGGPGMMEAAMKVYSEKEKRNGFEKVHVLQGMQAIEVAMKRFFYAYKQVVAVMMGSSEADNGFTQIFLEPTYFPSLDAAKTFLAYYWENNNQNVVPC* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0519 466 Pfam Hs1pro-1 N-terminus 24 204 IPR009869 GO:0006952
Gso14g0519 466 Pfam Hs1pro-1 protein C-terminus 207 458 IPR009743 -
Gso14g0519 466 Gene3D - 254 329 - -
Gso14g0519 466 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 229 452 IPR037217 GO:0019441|GO:0020037|GO:0046872
Gso14g0519 466 PANTHER NEMATODE RESISTANCE HSPRO2-LIKE PROTEIN 24 466 - -
Gso14g0519 466 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 24 466 IPR038759 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0519 Gso-Chr14 4966025 4967585 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0519 - - gmx:100778560 947.192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0519 14 4966025 4967585 Gso2g2172 2 46398493 46400062 GST
Gso18g0260 18 2283021 2284731 Gso14g0519 14 4966025 4967585 PCT
Gso13g1358 13 29081687 29083377 Gso14g0519 14 4966025 4967585 PCT
Gso14g0519 14 4966025 4967585 Gso18g0260 18 2283021 2284731 PCT
Gso14g0519 14 4966025 4967585 Gso13g1358 13 29081687 29083377 PCT