Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1358 ATGGTTGATTTACATTGGAAATCAAAGATGCCAAGTTCCGACATGCCTTCCAAAACTCTAAAACTCTCTCTCTCCGACAACAAGTCCTTACCCTCTTTGCAACTACCCTTCCGCACCACAGATATCTCTCACGCCGCACCTTCTGTTTGCGCCACTTACGACTACTATCTCCGTCTTCCTCAACTCAGAAAGCTTTGGAACTCCTCAGATTTTCCTAATTGGAACAACGAACCAATCTTAAAACCTATCTTGCAAGCTCTCGAAATCACCTTCCGCTTTCTCTCCATTGTTCTCTCCGATCCAAGACCTTACTCCAACCACAGAGAATGGACTCGCAGGATAGAGTCTCTTATCACACATCAAATTGAAATCATTGCCATACTTTGTGAAGATGAGGAACAAAATTCCGACACACGTGGCACTGCACCAACCGCTGATCTCAGCAGGAACAATAGCAGCGAGAGCAGAAGCTACAGCGAGGCAAGCCTGCTTCCGCGGCTTGCCACGTGGTACAAATCCAAGGACGTAGCGCAGAGGATCCTTCTCTCAGTTGAATGCCAAATGAGGAGGTGTTCCTACACGCTGGGTTTGGGTGAGCCGAACCTAGCGGGCAAACCGAGCCTGCTCTACGACCTCGTGTGTAAGCCGAACGAGATCCACGCGCTGAAGACGACGCCGTACGATGAGCGCGTAGAGAATCACGAGAACCACGCGTTGCACGCGACGCACCAGATCGCCGAGTCGTGGATCCACGCGTCGCGGAAGGTTCTAGAGAGGATCGCAGACGCGGTGCTCTCCAGAACCTTCGAGAAGGCGGCTGAGGACTGCTACGCCGTGGAAAGGATCTGGAAGCTTCTCGCGGAGGTGGAGGACCTCCACCTGATGATGGATCCGGACGATTTCTTGAGACTGAAGAATCAGCTCTCGGTGAAATCCTCCGGCGGCGAAACGGCTTCGTTCTGCTTCAGGTCGAAGGAGTTGGTTGAACTGACGAAGATGTGCAGAGATCTGAGGCACAAGGTGCCGGAGATATTGGAGGTGGAGGTGGATCCGAAGGGAGGACCGAGGATTCAAGAGGCGGCGATGAAGCTCTACGTTTCGAAGAGCGCGTTCGAGAAGGTTCACTTGTTGCAGGCGATGCAGGCGATTGAGGCGGCGATGAAGAGATTCTTCTACGCGTATAAGCAGGTGTTGGCGGTGGTGATGGGAAGCTCCGAGGCTAACGGTAACCGAGTTGGGTTGAGTTGCGACTCGGCTGACTCGTTGACTCAGATTTTCCTTGAACCGACGTATTTTCCAAGCTTGGATGCCGCCAAGACTTTTCTTGGATACTTGTGGGATAATAACGATAATAACAAATGGATATGA 1368 0.5183 MVDLHWKSKMPSSDMPSKTLKLSLSDNKSLPSLQLPFRTTDISHAAPSVCATYDYYLRLPQLRKLWNSSDFPNWNNEPILKPILQALEITFRFLSIVLSDPRPYSNHREWTRRIESLITHQIEIIAILCEDEEQNSDTRGTAPTADLSRNNSSESRSYSEASLLPRLATWYKSKDVAQRILLSVECQMRRCSYTLGLGEPNLAGKPSLLYDLVCKPNEIHALKTTPYDERVENHENHALHATHQIAESWIHASRKVLERIADAVLSRTFEKAAEDCYAVERIWKLLAEVEDLHLMMDPDDFLRLKNQLSVKSSGGETASFCFRSKELVELTKMCRDLRHKVPEILEVEVDPKGGPRIQEAAMKLYVSKSAFEKVHLLQAMQAIEAAMKRFFYAYKQVLAVVMGSSEANGNRVGLSCDSADSLTQIFLEPTYFPSLDAAKTFLGYLWDNNDNNKWI* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1358 455 Gene3D - 210 443 - -
Gso13g1358 455 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 453 IPR038759 -
Gso13g1358 455 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 214 442 IPR037217 GO:0019441|GO:0020037|GO:0046872
Gso13g1358 455 Pfam Hs1pro-1 N-terminus 1 185 IPR009869 GO:0006952
Gso13g1358 455 Pfam Hs1pro-1 protein C-terminus 188 448 IPR009743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1358 Gso-Chr13 29081687 29083377 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1358 - - gmx:547603 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0260 18 2283021 2284731 Gso13g1358 13 29081687 29083377 GST
Gso13g1358 13 29081687 29083377 Gso14g0519 14 4966025 4967585 PCT
Gso13g1358 13 29081687 29083377 Gso2g2172 2 46398493 46400062 PCT
Gso14g0519 14 4966025 4967585 Gso13g1358 13 29081687 29083377 PCT
Gso2g2172 2 46398493 46400062 Gso13g1358 13 29081687 29083377 PCT