Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1831 ATGACAAGTGCTGAGATGATACCCACCGCGCTGTCCATTGAAACCAGTGACCAGAGCAATGACCTCCGGTCGTCGCCGGTGAAGAAAATGTCTGTGGACGAGATGCTCCAGCAATACTGCGGCGAGTTCGGGAAGTGGCATCTTAGGCACTTTGTGCTCACCAATCTTTCATGGGTTTTGCTAGGATTTCACATCATGGTCATGATTTTTGCCGACCATGAACCCCACTGGAGTTGCCACGCCGGCTCCGTCGGTTCCGGTTGCAACGTGGCCGCCACGAGCATCTGCCAACTCAAACCGGGTTCGTGGGAGTGGGTCGGTGGCCACGGCGGCACCACCGTGTCGGAGTGGGGTTTAATTTGTGGTAACAAGTATAAGGTTGGGTTGGTCCGGGCCGTGTTCTTTGTCGGCTGGATGATTGGTGGTGGAGTATTTGGGCACCTCTCAGACTCCTTTCTTGGAAGGAAACATAGCCTTGGAGTAGCGAGTGCCCTAAACGCCATCTTTGGGTGCCTAACAGCACTATCTCCTAACTACTGGATCTACGTCGTCTTTCGCCTTCTCACAGGTTTCAGCAGCGGTGGGGTCGCCCTGTGTGCCTACGTCCTTGCATCTGAACCAATCGGCCCCAAGAAGCGCGGTGCCATTGGCATGTGCACCTTCTACTTCTTCTCAGGAGGCATTGCAGTTCTCTCTGGCATCGCTTACATCTTCCAAACGTGGCGCTATCTCTACATAGCCTCCTCCATACCCTCCTTTCTCTACACATTCCTTGTCTTTCCCTTTCTATTCGAGTCCCCGAGATGGTACCTCGTTCGCGGAAGAGTAAGCGAGGCAATGAAGCTCATGTCTGCCATTGCTTCTTCCAACGGAAAACACCTTCCCGAGGGCATTCTCCTCGCGCTCGACGAAGAAGTGAACAATGAATCCTCGTGTCAGGGCCGAAATTCACAAGATGAAAGGTTAGAAAACAAGGGTGGCGCGCGTGTTGGATCCATCGTAGACATTGTCCGCTGCCCCACCACACGGGTGCGGCTATTAATCGCCATGATGCTTAATTTCTTGTGCGATTTTGTTTACTACGGCCTTAGCTTAAACGTGGTGAACTTGAAAAATAACCTGTACTTGAACGTGTTGCTTAACGCGGTGGGGGAGATGCCAGCATTTGTGATAACGACGGTGCTTTTGGGCAAGTTTAACTTTGGAAGGAAACCCTTGACGGTGGCAACAATGTGGTTCAGCGGGTTCTTTTGTTTGATTGCAAGTTTAATGAAAAACGTTGGGGTGTGGAAGATTTTGAGAATGGTGTGTGGTGTTTTGGCGGTGTCTGGGATGGCAGGGACTTATAATTTGTTGTATATTTACACAACAGAGTTGTTTCCAACAGTGGTGAGGAACACAGCGCTTGGGTTTACTACACAGACGGCTCAAATGGGAGCCATGTTGGCACCGTTTGTGGTGGTTTTGGGTGGTTGGTTGACCTTTGCAGTGCTTGCAGCTTGTGGGATAATGGGAGGAGTGTTTGCTCTTGTTCTTCCAGAGACATCAAACCAACCCCTCTATGATACATTCAGTGGATTGGAAGCTGGACTTGCGTGA 1599 0.5084 MTSAEMIPTALSIETSDQSNDLRSSPVKKMSVDEMLQQYCGEFGKWHLRHFVLTNLSWVLLGFHIMVMIFADHEPHWSCHAGSVGSGCNVAATSICQLKPGSWEWVGGHGGTTVSEWGLICGNKYKVGLVRAVFFVGWMIGGGVFGHLSDSFLGRKHSLGVASALNAIFGCLTALSPNYWIYVVFRLLTGFSSGGVALCAYVLASEPIGPKKRGAIGMCTFYFFSGGIAVLSGIAYIFQTWRYLYIASSIPSFLYTFLVFPFLFESPRWYLVRGRVSEAMKLMSAIASSNGKHLPEGILLALDEEVNNESSCQGRNSQDERLENKGGARVGSIVDIVRCPTTRVRLLIAMMLNFLCDFVYYGLSLNVVNLKNNLYLNVLLNAVGEMPAFVITTVLLGKFNFGRKPLTVATMWFSGFFCLIASLMKNVGVWKILRMVCGVLAVSGMAGTYNLLYIYTTELFPTVVRNTALGFTTQTAQMGAMLAPFVVVLGGWLTFAVLAACGIMGGVFALVLPETSNQPLYDTFSGLEAGLA* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1831 532 ProSitePatterns Sugar transport proteins signature 2. 188 213 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gso12g1831 532 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 32 530 - -
Gso12g1831 532 SUPERFAMILY MFS general substrate transporter 124 520 IPR036259 -
Gso12g1831 532 Gene3D MFS general substrate transporter like domains 46 524 IPR036259 -
Gso12g1831 532 Pfam Sugar (and other) transporter 125 521 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gso12g1831 532 ProSiteProfiles Major facilitator superfamily (MFS) profile. 50 517 IPR020846 GO:0022857
Gso12g1831 532 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 32 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1831 Gso-Chr12 41997695 42001582 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1831 20 528 Organic Solute Cotransporters AT3G20660 60.653 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1831 K08202 - gmx:100794967 1057.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1831 12 41997695 42001582 Gso11g3033 11 46214216 46218778 GST
Gso12g1831 12 41997695 42001582 Gso12g1148 12 16947514 16952960 PCT
Gso12g1831 12 41997695 42001582 Gso6g2200 6 42129811 42133142 PCT
Gso12g1148 12 16947514 16952960 Gso12g1831 12 41997695 42001582 PCT
Gso6g2200 6 42129811 42133142 Gso12g1831 12 41997695 42001582 PCT