Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3033 ATGGCCGCCACATTCCCCTCCTCCGACATCCACGACCTCCGCTCGCCGATGCTACCAGCGGCGGCGGTGGCGGCGAAGAAGCCGGCGATGGAGAAGCTCTGCATCGACGACATGCTGCAGAAACACTGCGGCGAGTTCGGGCGGTGGCAGCTCAAGCACTTCATCCTCACCAGCCTCGCGTGGGCGCTCGAGGCCTTTCACACCATGGTCATGATCTTCGCCGACCGCGAACCGGACTGGAAGTGCGTCGCCGGCGCCGCCTGCGACGGCGGCGACTTGTGCGGTCTCTCGCCGGAGTCGAGGGAGTGGATCGGCGGCCGCGGCGGCTCCACGGTTTCCGATTGGGGTTTGATTTGCGGAGATAAGTTTAAGGTTGGATTGGTGCAGGCTGTTTTCTTCTTTGGCTGCATGATTGGTGCTGGAACATTTGGCCACCTCTCAGACTCCTCTTTAGGAAGGAAAGGCTCTCTCACAGTGGTTTGTGCCCTAAACACCATCTTCGGCTGCTTAACAGCCCTGTCCCCAAACTACTGGATCTACGTCCTCCTCCGCCTCCTCACGGGCTTCAGCAGCGGTGGCGTCGGCCTCACTGCCTTCGTCCTTGCCACCGAACCAATCGGCCCAACCAAACGTGGTACAGCGGGTATGTCCACCTTCTACTTCTTCTCCGGTGGCATTGCACTTCTCTCAGGCATCGCCTACATCTTCCAAACATGGCGCTATCTATACATAGCTTCCTCCATCCCCTCCTTCCTCTACATCATCCTTGTCCTTCCCTTTATCTCCGAGTCTCCAAGATGGTACCTCATTCGTGGCAAAGTTACCGAAGCCATGAAACTCATGTCCACCATTGCTTCTTCCAATGGTAAACACCTTCCTGATGGTGTTCTCCTTGCACTTGACAACGAAACATCGCCCACAACAAACCAAGGTTCAGGCTATGACATAACAGAAATCATGAATTACAAAAACGAAAACAAAGATGCACTCATTGGGTCCATCATAGACGTGGTTTGTTCACCCATCACTCGTATGAGGTTGTTCATTGCGGTGGCTCTTAATTTCCTAGCCTCTGTGGTGTACTATGGGCTTAGTTTAAACGTCATGAACCTGGAAACCAACCTTTACGTGAACGTGATGCTGAACTCGGTGGCGGAGATGCCAGCCTTTACGATAACGGCGGTGCTTCTGGACCGGTTTGGACGGAAGCCATTGACGGTGGCAACGATGTGGTTCAGTGGGTTCTTTTGCTTGATGGGGAGTTTGGTGAGCAACGTTGGGGTGTGGAAGGTGGTGAGAATGGTGTGTGGTGTTTTGGGGATATTTGGGATGGCGGGGACTTATAATTTGCTGTTTATTTACACGGCGGAGCTGTTTCCGACAGTGGTGAGGAACGCCGCGCTCGGGTGTACTACTCAAGCGGCGCAAATGGGAGCGATATTGGCGCCGTTTGTGGTCGTTTTGGGAGGGTATTTGCCGTTTGCGGTGTTTGCAGCATGTGGGATAGTGGGAGGGATGTTTGCGTTTAATCTTCCCGAGACTCTAAACCAACCTCTCTATGATACATTTGGTGGACTGGAAGCTGGACTTGCTTGA 1596 0.5395 MAATFPSSDIHDLRSPMLPAAAVAAKKPAMEKLCIDDMLQKHCGEFGRWQLKHFILTSLAWALEAFHTMVMIFADREPDWKCVAGAACDGGDLCGLSPESREWIGGRGGSTVSDWGLICGDKFKVGLVQAVFFFGCMIGAGTFGHLSDSSLGRKGSLTVVCALNTIFGCLTALSPNYWIYVLLRLLTGFSSGGVGLTAFVLATEPIGPTKRGTAGMSTFYFFSGGIALLSGIAYIFQTWRYLYIASSIPSFLYIILVLPFISESPRWYLIRGKVTEAMKLMSTIASSNGKHLPDGVLLALDNETSPTTNQGSGYDITEIMNYKNENKDALIGSIIDVVCSPITRMRLFIAVALNFLASVVYYGLSLNVMNLETNLYVNVMLNSVAEMPAFTITAVLLDRFGRKPLTVATMWFSGFFCLMGSLVSNVGVWKVVRMVCGVLGIFGMAGTYNLLFIYTAELFPTVVRNAALGCTTQAAQMGAILAPFVVVLGGYLPFAVFAACGIVGGMFAFNLPETLNQPLYDTFGGLEAGLA* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3033 531 ProSiteProfiles Major facilitator superfamily (MFS) profile. 53 516 IPR020846 GO:0022857
Gso11g3033 531 ProSitePatterns Sugar transport proteins signature 1. 393 409 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gso11g3033 531 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 35 529 - -
Gso11g3033 531 Pfam Sugar (and other) transporter 122 520 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gso11g3033 531 ProSitePatterns Sugar transport proteins signature 2. 186 211 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gso11g3033 531 SUPERFAMILY MFS general substrate transporter 114 519 IPR036259 -
Gso11g3033 531 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 35 529 - -
Gso11g3033 531 Gene3D MFS general substrate transporter like domains 109 523 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3033 Gso-Chr11 46214216 46218778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3033 11 527 Organic Solute Cotransporters AT3G20660 68.533 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3033 K08202 - gmx:100797665 1052.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1831 12 41997695 42001582 Gso11g3033 11 46214216 46218778 GST
Gso11g3033 11 46214216 46218778 Gso12g1148 12 16947514 16952960 PCT
Gso11g3033 11 46214216 46218778 Gso6g2200 6 42129811 42133142 PCT
Gso12g1148 12 16947514 16952960 Gso11g3033 11 46214216 46218778 PCT
Gso6g2200 6 42129811 42133142 Gso11g3033 11 46214216 46218778 PCT