Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1493 ATGTCAGAGCAGAAGAAACCCCCCCAAAGCAGAGTTTTCTATGTTAGAATGAAGCTCCTGCACAAACAAGGGAACAAGCCTCAGCAAGACAAAAACAACAACTGCTTTCACACATATTACAAATGGGTTCTCTGGTTTTCTTTCTCCCTCTATTTCTTCACTTCCTATCTCATCACTAGCAACCCCAACAACACACCAACCTCTGCAGACACATCCCATGTCTCAAACTCCGAATCCAACGTTGTCTCTCCTACCCTTGTCGAATCTACTACGAACACTCTAGGGGTGCTGAAGAATATGAAGGTGTTCGTGTACGAGCTTCCTCCAAAGTACAACACCGATTGGCTTGCGAACGAGAGGTGTAGCAGTCATTTATTCGCTTCGGAAGTTGCTATTCACAGGGCACTGTTAACGAGCGAGGTTCGCACGTTTGACCCATACGAAGCTGATTTCTTCTTCGTCCCAGTTTACGTGTCTTGCAACTTCAGCGCCGTCAACGACTTCCCGGCGATTGGCCACGCGCGAACTCTTATATCCTCCGCCGTCAACCTCGTCTCCACCGAATACCCATTCTGGAACCGCAGCAGAGGATCCGACCACGTCTTCGTCGCTTCGCACGACTTCGGCGCGTGCTTTCACACCCTGGAGGACGTGGCTATGGCTGATGGAATACCGATAATCTTGAAGAACTCGATAGTGTTGCAGACATTCGGCGTCATTCACCAGCATCCGTGTCAAGAGGTTGAGAATGTGGTGATACCGCCTTACGTTTCGCCGGAAAGTGTAAGGAGTACGCTGGAAAAGTTTCCGGTGACCGGACGGCGAGACATTTTTGCTTTTTTCCGAGGGAAAATGGAAGTCCATCCTAAAAATGTCAGCCGACGGTTTTACAGCAAGCGAGTGAGGACGGAGATATGGCGGAAGTTCAACGGTGACCGGAGGTTTTACCTGCAGAGACATAGGTTTGCCGGTTACCAGTTGGAAATTGCACGGTCGGTGTTTTGTTTGTGTCCGTTAGGGTGGGCTCCGTGGAGTCCGAGGTTGGTGGAGTCGGTTGCGTTGGGTTGTGTGCCGGTTGTGATTGCGGATGGGATACAGTTGCCGTTTTCCTCCGCCGTGCGGTGGTCGGAGATATCGTTGAGCGTGGCGGAGAGGGACGTGGGGAAGTTGGGGAAGATTCTGGAGCGAGTGGCGGCGACGAACCTGAGTGTCATTCAGAGGAACCTGTGGGACCCACGGACAAGGCGGGCCCTTCTTTTCAACAACAACAAGGTGCAAGAAGGGGACGCCACGTGGCAAGTTCTGGTTAGTTTGAGTGAGAAGCTAGGTAGGTCGCAGCGAAGGTCTTCGGTTGCTGGCCAATTGAAGAGTGACACGTAA 1380 0.5167 MSEQKKPPQSRVFYVRMKLLHKQGNKPQQDKNNNCFHTYYKWVLWFSFSLYFFTSYLITSNPNNTPTSADTSHVSNSESNVVSPTLVESTTNTLGVLKNMKVFVYELPPKYNTDWLANERCSSHLFASEVAIHRALLTSEVRTFDPYEADFFFVPVYVSCNFSAVNDFPAIGHARTLISSAVNLVSTEYPFWNRSRGSDHVFVASHDFGACFHTLEDVAMADGIPIILKNSIVLQTFGVIHQHPCQEVENVVIPPYVSPESVRSTLEKFPVTGRRDIFAFFRGKMEVHPKNVSRRFYSKRVRTEIWRKFNGDRRFYLQRHRFAGYQLEIARSVFCLCPLGWAPWSPRLVESVALGCVPVVIADGIQLPFSSAVRWSEISLSVAERDVGKLGKILERVAATNLSVIQRNLWDPRTRRALLFNNNKVQEGDATWQVLVSLSEKLGRSQRRSSVAGQLKSDT* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1493 459 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 29 453 IPR004263 GO:0006486|GO:0016757
Gso12g1493 459 PANTHER GLUCURONOSYLTRANSFERASE, PUTATIVE-RELATED 29 453 - -
Gso12g1493 459 Pfam Exostosin family 98 396 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1493 Gso-Chr12 38188334 38190940 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1493 K20889 - gmx:100797984 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1493 12 38188334 38190940 Gso11g3348 11 49288466 49291209 GST
Gso12g1493 12 38188334 38190940 Gso12g0654 12 6345014 6348121 PCT
Gso12g1493 12 38188334 38190940 Gso11g1462 11 16963400 16966255 PCT
Gso12g0654 12 6345014 6348121 Gso12g1493 12 38188334 38190940 PCT
Gso11g1462 11 16963400 16966255 Gso12g1493 12 38188334 38190940 PCT