Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3348 ATGTCAGAGCAGAAGAAACCCCCCAAAAGCAGAGTTTTCTATCTTAGAATGAAGCTCCTACACAAACAAGGGAACAAACCTCAACAAGACAAGAACAACAACTGGTTTCACACATATTACAAATGGGTTCTCTGGCTTTCTTTCTCCCTCTATTTCTTCACTTCCTATCTCATCACCAGCAACCCCAACAACACTAACACACCAACGTCTCATGTTTCAAACTCCGAATCCAACGTTGTCCCTCGTACCCTTGTCGAATCCACTTCCAACACTCTAGGGGTGCTGAAGAATATGAAGGTGTTTGTGTACGAGCTTCCTCCAAAGTACAACACCGATTGGCTTGCGAACGAGAGGTGTAGCAATCATTTATTCGCTTCGGAAGTTGCTATTCACAGGGCATTGTTAACAAGCGAAGTTCGCACGTTTGACCCATACGAAGCTGATTTCTTCTTCGTCCCCGTTTACGTGTCTTGCAACTTCAGCGCCGTCAATGGCTTCCCGGCGATTGGCCACGCGCGCACTCTCATATCCTCCGCCGTCAACCTGGTCTCCACCGAATACCCATTCTGGAACCGCAGCAGAGGATCCGACCACGTCTTCGTCGCTTCCCACGACTTCGGCGCATGCTTTCACACCCTGGAGGACGTGGCCATGGCTGATGGAATACCGAAAATTTTGAAGAACTCGATAGTGTTGCAGACATTCGGCGTCATTCACCCGCATCCGTGTCAAGACGTTGAGAATGTGGTGATACCGCCTTACGTATCGCCGGAAAGTGTACGGAGCACGCTGGAGAAGTTTCCGGTGAACGGACGGCGAGACATTTGGGCGTTTTTCCGAGGGAAAATGGAAGTACATCCTAAAAATGTCAGCGGACAGTTTTACAGCAAGCGAGTGAGGACGGAGATATGGCGGAAGTTCAACGGTGATCGGAGGTTTTACCTGCAGAGGCGTAGGTTTGCCGGTTACCAGTTGGAAATTGCACGTTCGGTGTTTTGTTTGTGTCCGTTAGGGTGGGCTCCGTGGAGTCCGAGGTTGGTGGAGTCGGTAGCGTTGGGGTGTGTGCCGGTTGTTATCGCCGATGGGATACGGTTGCCGTTTTCCTCCGCGGTGAGGTGGTCGGAGATATCGTTGACGGTAGCTGAGAGGGACGTGGGGAAGCTGGGGAAGATTCTTGAGCGCGTGGCGGCGACGAACCTTAGTGTCATTCAGAAGAGCCTGTGGGACCCGGGGACAAGGCGGGCCCTGCTTTTCAACAACAACAAGAAGGTTGAGGAAGGGGACGCCACGTGGCAAGTTATGGTTAGTTTGAGTGAGAAGCTGGGTAGGTCTTACCGAAGGTCTTTGGTTGGTGACCAATTGAAGAGTGACACGTAA 1377 0.5134 MSEQKKPPKSRVFYLRMKLLHKQGNKPQQDKNNNWFHTYYKWVLWLSFSLYFFTSYLITSNPNNTNTPTSHVSNSESNVVPRTLVESTSNTLGVLKNMKVFVYELPPKYNTDWLANERCSNHLFASEVAIHRALLTSEVRTFDPYEADFFFVPVYVSCNFSAVNGFPAIGHARTLISSAVNLVSTEYPFWNRSRGSDHVFVASHDFGACFHTLEDVAMADGIPKILKNSIVLQTFGVIHPHPCQDVENVVIPPYVSPESVRSTLEKFPVNGRRDIWAFFRGKMEVHPKNVSGQFYSKRVRTEIWRKFNGDRRFYLQRRRFAGYQLEIARSVFCLCPLGWAPWSPRLVESVALGCVPVVIADGIRLPFSSAVRWSEISLTVAERDVGKLGKILERVAATNLSVIQKSLWDPGTRRALLFNNNKKVEEGDATWQVMVSLSEKLGRSYRRSLVGDQLKSDT* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3348 458 Pfam Exostosin family 96 394 IPR040911 -
Gso11g3348 458 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 29 452 IPR004263 GO:0006486|GO:0016757
Gso11g3348 458 PANTHER GLUCURONOSYLTRANSFERASE, PUTATIVE-RELATED 29 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3348 Gso-Chr11 49288466 49291209 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3348 K20889 - gmx:100807050 929.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1493 12 38188334 38190940 Gso11g3348 11 49288466 49291209 GST
Gso11g3348 11 49288466 49291209 Gso12g0654 12 6345014 6348121 PCT
Gso11g3348 11 49288466 49291209 Gso11g1462 11 16963400 16966255 PCT
Gso12g0654 12 6345014 6348121 Gso11g3348 11 49288466 49291209 PCT
Gso11g1462 11 16963400 16966255 Gso11g3348 11 49288466 49291209 PCT