Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0654 ATGGCTCAGAAAAGACCCCCAAATAGCAGGGGGTACTACGTTAAGATGAAACTCCTTCACAAACATGGCAGACCTCATCATCATCATCAGCAGCAGCAAGAAAAAAACTGCCTCTACAGATACTACAAATGGGTTCTCTGGCTTTCTCTTTCCCTCTATTTCTTCACCTCCTACCTCATCAGCAACAACAACAACAACAACAACCACTCCAAACAACCATCTCACGTCTCGAGAGCCCTCATGGAATCAAACCACACCACACCTCCTCAACAACAAGCTCTTAACTCTCTAGGGTCTTTGAAGAACTTGAAGGTGTTTGTATATGATCTTCCTCAGAAGTACAACACGGATTGGTTATCGAACGAGAGGTGCAGCAAACATTTGTTCGCGTCGGAGGTTGCAATTCACAGGGCTTTGTTGACCAGCGAGGTTCGCACGTTTGACCCATACGACGCTGACTTTTTCTTCGTCCCCGTTTATGTGTCTTGCAATTTCAGCACCGTCAACGGCTTCCCGGCGATTGGCCACGCGCGCTCCCTTATCGCGTCCGCTGTCAGCCTCGTCTCCTCGGAGTACCCCTTCTGGAACCGGAGCAGAGGCTCCGACCACGTCTTCGTCGCCTCGCACGATTTTGGCTCGTGTTTCCACACCCTGGAGGACGTGGCGATGGCTGATGGCGTGCCAGAGATTATGAGGAACTCGATCGTGTTGCAGACGTTTGGCGTAGTGTATGATCACCCGTGCCAGAGTGTCGAGCACGTGGTGATTCCGCCGTACGTTTCGCCGGAAAGTGTACGGGACACCATGGAGAATTTTCCGGTGAACGGACGGCGAGATATTTGGGCTTTCTTCCGAGGGAAAATGGAACTTCATCCTAAGAACGTTAGTGGACGATTTTACAGCAAGAAAGTGCGGACGGTGATATGGAGGAAGTTCAACGGTGATCGGCGGTTTTACCTGCAGAGGCAAAGGTTTGCCGGTTACCAGTCAGAGATTGCACGTTCGGTGTTTTGTTTATGTCCTCTGGGGTGGGCCCCATGGAGTCCGAGGCTGGTCGAGTCCGTTGCCTTGGGTTGCGTGCCAGTAATCATAGCGGACGGTATCCGGTTGCCGTTTATCTCCGCCGTGAAGTGGCCGGAGATATCAATCACGGTGGCGGAGAAAGACGTGGGGAGGCTGGCGGAGATACTCGAGCGCGTGGCGGCGACAAACCTCAGCACCATTCAGAGGAACCTGTGGGACCCAGTGACGAGGAGTGCCCTACTTTTCAACAGCCAGGTCCAGAAAGGGGATGCCACGTGGCAGGTCCTAAGGGCTTTAAGTGAAAAGCTTGATAGATCCTTCAGAAGCTCGAGGGTTTCTCGCCAATTGGATTTTGACACGTAA 1386 0.5231 MAQKRPPNSRGYYVKMKLLHKHGRPHHHHQQQQEKNCLYRYYKWVLWLSLSLYFFTSYLISNNNNNNNHSKQPSHVSRALMESNHTTPPQQQALNSLGSLKNLKVFVYDLPQKYNTDWLSNERCSKHLFASEVAIHRALLTSEVRTFDPYDADFFFVPVYVSCNFSTVNGFPAIGHARSLIASAVSLVSSEYPFWNRSRGSDHVFVASHDFGSCFHTLEDVAMADGVPEIMRNSIVLQTFGVVYDHPCQSVEHVVIPPYVSPESVRDTMENFPVNGRRDIWAFFRGKMELHPKNVSGRFYSKKVRTVIWRKFNGDRRFYLQRQRFAGYQSEIARSVFCLCPLGWAPWSPRLVESVALGCVPVIIADGIRLPFISAVKWPEISITVAEKDVGRLAEILERVAATNLSTIQRNLWDPVTRSALLFNSQVQKGDATWQVLRALSEKLDRSFRSSRVSRQLDFDT* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0654 461 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 31 451 IPR004263 GO:0006486|GO:0016757
Gso12g0654 461 PANTHER GLUCURONOSYLTRANSFERASE, PUTATIVE-RELATED 31 451 - -
Gso12g0654 461 Pfam Exostosin family 101 399 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0654 Gso-Chr12 6345014 6348121 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0654 K20889 - gmx:100782077 906.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0654 12 6345014 6348121 Gso11g1462 11 16963400 16966255 GST
Gso12g1493 12 38188334 38190940 Gso12g0654 12 6345014 6348121 PCT
Gso11g3348 11 49288466 49291209 Gso12g0654 12 6345014 6348121 PCT
Gso12g0654 12 6345014 6348121 Gso12g1493 12 38188334 38190940 PCT
Gso12g0654 12 6345014 6348121 Gso11g3348 11 49288466 49291209 PCT