Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1462 ATGGCTCAGCAGAAAAGACCCCCAAATAGCAGGGGCTACTACGTTAAGATGAAACTCCTTCAAAAACATGGCAGACCTCATCATCACCATCACCATCACCAGCAAGAAAAAAACTGCTTCTACAGATACTACAAATGGGTTCTCTGGCTTTCTCTTTCTCTCTATTTCTTCACTTCCTACCTCATCAGCAACAACAACAACCACCACACCAAAAAACCTTCTCACGTCTCCAGAGCACTCATCCAATCAAACCACACCACAACTCCTCAACATGCTCTTAACTCTCCAGAATCTTTGAAGAAGTTGAAGGTGTTTGTCTACGACCTTCCTCCGAAGTACAACACGGATTGGTTGACGAACGAGAGGTGCAGCAAACATTTGTTTGCGTCGGAGGTTGCAATTCACAGGGCTTTGTTGACCAGCGAGGTTCGCACGTTTGACCCATACGACGCTGACTTTTTCTTCGTCCCCGTTTACGTGTCTTGCAACTTCAGCACCGTGAATGGCTTCCCCGCGATTGGCCACGCGCGCTCCCTCATCGCGTCCGCGGTAAACCTCATCTCCTCGGAGTACCCCTTCTGGAACCGAAGCAGAGGCTCCGACCACGTCTTCGTCGCGTCGCACGATTTCGGCTCGTGTTTCCACACCCTGGAGGACGTGGCGATGGCTGATGGCGTGCCAGAGATTGTGAGGAACTCGATCGTGTTGCAGACGTTTGGCGTTGTGTACGATCACCCGTGCCAGAAGGTCGAACACGTAGTGATTCCACCGTACGTTTCGCCGGAAAGTGTAAGGGACACGATGGAGAATTTTCCGGTGGACGGACGGCGAGATATTTGGGCTTTCTTCCGAGGGAAAATGGAAGTCCATCCCAAGAACGTTAGTGGACGATTTTACAGCAAGAAAGTGCGGACGGTGATATGGAGGAAGTTCAACGGTGACCGGAGGTTTTACCTGCAGAGGCATAGGTTTGCCGGTTACCAGTCAGAGATTGCACGTTCGGTGTTTTGTTTATGTCCTCTGGGGTGGGCCCCATGGAGTCCGAGGCTGGTCGAGTCCGTCGCCTTGGGTTGCGTGCCAGTTGTCATAGCGGACGGTATTCGGTTGCCGTTTGTCTCCGCGGTGAAGTGGTCGGAGATATCGGTGACGGTGGCGGAGAAAGACGTGGGGAGGCTGGCTGAGATACTGGAGCGCGTGGCGGCGACAAACCTGAGCACAATTCAAAGGAACCTGTGGGACCCAGCAACGAGGAGGGCCCTACTTTTCAACAGCCAGGTCCAGGTAGGGGATGCCACGTGGCAGGTCCTGAGGGCTTTGAGTGAAAAGCTTGATAGATCCTTCAGAAGCTCGAGGGTTTCACGCCAATTGGATTTTGACACGTAA 1383 0.5264 MAQQKRPPNSRGYYVKMKLLQKHGRPHHHHHHHQQEKNCFYRYYKWVLWLSLSLYFFTSYLISNNNNHHTKKPSHVSRALIQSNHTTTPQHALNSPESLKKLKVFVYDLPPKYNTDWLTNERCSKHLFASEVAIHRALLTSEVRTFDPYDADFFFVPVYVSCNFSTVNGFPAIGHARSLIASAVNLISSEYPFWNRSRGSDHVFVASHDFGSCFHTLEDVAMADGVPEIVRNSIVLQTFGVVYDHPCQKVEHVVIPPYVSPESVRDTMENFPVDGRRDIWAFFRGKMEVHPKNVSGRFYSKKVRTVIWRKFNGDRRFYLQRHRFAGYQSEIARSVFCLCPLGWAPWSPRLVESVALGCVPVVIADGIRLPFVSAVKWSEISVTVAEKDVGRLAEILERVAATNLSTIQRNLWDPATRRALLFNSQVQVGDATWQVLRALSEKLDRSFRSSRVSRQLDFDT* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1462 460 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 32 450 IPR004263 GO:0006486|GO:0016757
Gso11g1462 460 Pfam Exostosin family 100 398 IPR040911 -
Gso11g1462 460 PANTHER GLUCURONOSYLTRANSFERASE, PUTATIVE-RELATED 32 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1462 Gso-Chr11 16963400 16966255 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1462 K20889 - gmx:100818569 931.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1462 11 16963400 16966255 Gso11g1462 11 16963400 16966255 ECH
Gso12g0654 12 6345014 6348121 Gso11g1462 11 16963400 16966255 GST
Gso12g1493 12 38188334 38190940 Gso11g1462 11 16963400 16966255 PCT
Gso11g3348 11 49288466 49291209 Gso11g1462 11 16963400 16966255 PCT
Gso11g1462 11 16963400 16966255 Gso12g1493 12 38188334 38190940 PCT
Gso11g1462 11 16963400 16966255 Gso11g3348 11 49288466 49291209 PCT