Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0732 ATGACGGAGGTGCTCCATTTCTCATCCTCTTCGTCGCCAGCCACTTGTTCTTCTGATGGCATTCTCCAAGAAGCACCGCCACCACCACCACCTTCTTCTTCTGTGAGCGCGGTGGTGGACGGGTTTTCTACGGTCACCGACTGTGACGGGTGCGGGGTCACATTCACAGACAGAACGCAGCAGCAGGAGGAGGAGCTCTCTCTTCTGGCAATTCTTGTGACCCTCTTGAGGAAATCGCTTATTGCTTGCAACAAGAGCGAGGAGGGCCATGGCGCCATGGAGATTGGGTGGCCCACTAACGTGCGCCATGTGGCGCATGTCACCTTCGACAGGTTCAATGGCTTCTTGGGCTTGCCTTCTGAGTTCGAGCCCGAAGTCTCCACAAGACCTCCCAGTGCTAGTGCAACTGTTTTTGGAGTTTCAACAGAATCCATGCAGTTATCATATGACACGAGAGGGAACAGTGTGCCAACCATACTGCTACTAATGCAAAGGCACTTGTATGCTCTCGGAGGGTTGCAGGAAGAGGGAATTTTCAGAATTAATGCAGATAATAGTCAAGAGGAGTCTGTTAGGGATCAATTAAATAGGGGATTGGTCCCAGAAGATGTTGATATACATTGTTTGGCAGGACAAATTAAGGCTTGGTTTAGGGAACTGCCTACTGGTGTTCTGGATTCTTTATCACCAGAGCAAGTAATGCAATGCCAGACTGAAGAGGATTGTACTGAACTGGCCGGCCAGCTACCTCACACTGAAGCTTCCCTTTTGGACTGGGCTATTAATCTAATGGCTGATGTTGCCCAAGAGGAAGACTTGAATAAGATGAATGCACGGAACATCGCCATGGTTTTTGCACCAAATATGACTCATATGGCAGACCCTTTGACTGCATTGATGTATGCAGTTCAAGTGATGAACTTCCTGAAGAATCTTATATTAAGGACCCTGCGAGAAAGAAAGTATTGTGTCGTAGAATCGTCTCCTGGGTTTTGTTTAGAGCCTTCTGATGAGAATGGGGACCACAGTCTTTTGGAGTCCTGTCAGCAAGATGACATTGCCACTGAAAATGAAGAGGCCGGGGAAACCTTTGTTTACGAGAAAACTGAATTAGACTGTTCCCCTGAATCTCTCCAAAGCAAATATTCAACTGAAGGAGAATGTGGCAGTTTGATAGGCTCTCCTGAGAATCTGGTTTGTGAGGAGGACTTGTATTGTGAGTTTCCACCCAAAGGAAACATTGAGAAGAGTAAGAGTGGACAATCAAGTAATTCCAGTGCTAAAAAGGGGTCCAAAAGAACCAGAGGCCTGCTCCAACCTGTGATCCATGCAACAGTGGCTGTTGATAAAAAGGGTATTAGCAATCTTAGCCGCATAGATTCAAGATCAGAGCGGATAGAAGCCTGGCGGTGA 1413 0.4735 MTEVLHFSSSSSPATCSSDGILQEAPPPPPPSSSVSAVVDGFSTVTDCDGCGVTFTDRTQQQEEELSLLAILVTLLRKSLIACNKSEEGHGAMEIGWPTNVRHVAHVTFDRFNGFLGLPSEFEPEVSTRPPSASATVFGVSTESMQLSYDTRGNSVPTILLLMQRHLYALGGLQEEGIFRINADNSQEESVRDQLNRGLVPEDVDIHCLAGQIKAWFRELPTGVLDSLSPEQVMQCQTEEDCTELAGQLPHTEASLLDWAINLMADVAQEEDLNKMNARNIAMVFAPNMTHMADPLTALMYAVQVMNFLKNLILRTLRERKYCVVESSPGFCLEPSDENGDHSLLESCQQDDIATENEEAGETFVYEKTELDCSPESLQSKYSTEGECGSLIGSPENLVCEEDLYCEFPPKGNIEKSKSGQSSNSSAKKGSKRTRGLLQPVIHATVAVDKKGISNLSRIDSRSERIEAWR* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0732 470 Gene3D CRIB domain 91 127 IPR036936 -
Gso12g0732 470 SUPERFAMILY GTPase activation domain, GAP 135 314 IPR008936 GO:0007165
Gso12g0732 470 MobiDBLite consensus disorder prediction 1 35 - -
Gso12g0732 470 CDD RhoGAP 157 313 - -
Gso12g0732 470 Pfam RhoGAP domain 157 291 IPR000198 GO:0007165
Gso12g0732 470 ProSiteProfiles CRIB domain profile. 95 108 IPR000095 -
Gso12g0732 470 PANTHER PAK-BOX/P21-RHO-BINDING DOMAIN RHO GTPASE ACTIVATING PROTEIN 1 470 - -
Gso12g0732 470 SMART RhoGAP_3 154 317 IPR000198 GO:0007165
Gso12g0732 470 MobiDBLite consensus disorder prediction 415 432 - -
Gso12g0732 470 MobiDBLite consensus disorder prediction 1 19 - -
Gso12g0732 470 MobiDBLite consensus disorder prediction 415 438 - -
Gso12g0732 470 CDD CRIB 93 133 - -
Gso12g0732 470 ProSiteProfiles Rho GTPase-activating proteins domain profile. 140 321 IPR000198 GO:0007165
Gso12g0732 470 SMART PBD_5 95 129 IPR000095 -
Gso12g0732 470 PANTHER MKIAA1688 PROTEIN 1 470 IPR044785 GO:0005096
Gso12g0732 470 Gene3D Rho GTPase activation protein 128 321 IPR008936 GO:0007165
Gso12g0732 470 Pfam P21-Rho-binding domain 94 121 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0732 Gso-Chr12 7406921 7411110 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0732 - K20642 gmx:100775644 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0732 12 7406921 7411110 Gso11g1380 11 15727961 15732485 GST
Gso12g1561 12 39087261 39091428 Gso12g0732 12 7406921 7411110 PCT
Gso11g3287 11 48688211 48692203 Gso12g0732 12 7406921 7411110 PCT
Gso12g0732 12 7406921 7411110 Gso12g1561 12 39087261 39091428 PCT
Gso12g0732 12 7406921 7411110 Gso11g3287 11 48688211 48692203 PCT