Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3602 ATGGTTATGTGCTTGAAGCTGAAGCTCATAATGTGGAATGTGGCACTGCTTCTGGCTTTTTCTCTCATTGGTTCTGCTAAGGCCTCAGTGTCCTATGACTCTAAGGCTATCACCATTAATGGCCAGAGAAGGATCCTCATTTCTGGATCCATTCATTACCCAAGGAGCACCCCTGAGATGTGGCCAGATCTTATTCAAAAGGCCAAGGACGGAAGCTTGGATGTGATTCAGACTTATGTTTTCTGGAATGGACACGAACCTTCACCTGGCAAGTATTATTTTGAGGGGAACTATGATCTGGTGAAGTTCATAAAGCTGGTGCAGCAAGCAGGCCTTTATGTTCATCTCAGGATTGGTCCTTATGTCTGTGCTGAGTGGAACTTTGGTGGTTTCCCTGTTTGGCTAAAGTACATTCCAGGAATCAGTTTCAGAACAGACAATGAACCATTTAAGGTTCAAATGCAAAAATTTACCACGAAGATTGTTGATTTGATGAAAGCGGAGAGGTTATATGAATCTCAGGGAGGTCCAATAATTATGTCCCAGATTGAAAATGAATATGGACCTATGCAGTATGAAATTGGTGCTGCCGGTAAAGCTTACACTAAGTGGGCAGCAGAAATGGCTATGGAACTTGGTACTGGGGTTCCATGGATCATGTGCAAGCAAGATGACACTCCTGATCCTCTTATTAACACTTGCAATGGCTTCTATTGTGATTATTTCTCTCCAAATAAGGCTTACAAGCCAAAGATGTGGACAGAAGCTTGGACTGGCTGGTTTACCGAGTTTGGAGGTCCTGTTCCTCATCGACCTGCTGAAGACTTGGCATTTTCAGTTGCAAGGTTTATACAGAAAGGGGGATCATTTATAAATTATTACATGTATCATGGAGGAACAAATTTTGGTCGAACTGCTGGTGGTCCCTTTATTGCTACAAGCTATGATTATGATGCACCACTTGATGAATATGGATTGCTCAGGCAACCAAAGTGGGGTCATCTGAAGGATTTACACAGAGCAATAAAACTCTGTGAACCAGCTTTAGTATCTGGAGATCCTACTGTAACAAAGATTGGAAACTATCAAGAGGCTCATGTCTTTAAATCAATGTCTGGAGCCTGTGCCGCATTCCTTGCAAACTACAACCCCAAATCTTATGCAACAGTGGCATTTGGAAACATGCATTACAACTTGCCTCCTTGGTCTATAAGCATTCTTCCTGATTGCAAGAACACCGTTTATAACACTGCTAGGGTTGGTTCTCAGAGTGCCCAGATGAAGATGACTCGTGTTCCTATTCATGGTGGTCTCTCTTGGCTATCATTCAACGAAGAAACAACCACAACTGATGATAGTTCCTTCACAATGACTGGCCTGTTGGAGCAGTTAAATACAACAAGAGATTTATCTGACTACTTGTGGTACTCCACAGATGTTGTGCTTGATCCCAATGAAGGATTTCTGAGAAACGGAAAGGATCCTGTTCTTACTGTGTTTTCTGCTGGGCATGCTTTGCATGTTTTTATAAATGGTCAGCTATCAGGAACTGCATATGGAAGCTTAGAATTCCCTAAACTGACATTTAACGAGGGAGTGAAGCTCAGAACCGGTGTTAACAAGATCTCTCTTCTAAGTGTTGCAGTTGGACTCCCGAATGTTGGTCCTCATTTTGAAACATGGAATGCTGGTGTTCTTGGCCCGATTTCATTAAGTGGTCTCAACGAAGGGAGAAGGGACTTGTCTTGGCAGAAATGGTCTTATAAGGTTGGTCTTAAAGGTGAAACCTTGAGTCTTCACTCTCTTAGTGGAAGTTCGTCAGTGGAGTGGATTCAGGGATCTTTAGTTTCTCAAAGGCAGCCATTGACTTGGTACAAAACAACATTTGACGCGCCAGATGGGACTGCACCATTGGCTTTAGACATGAACAGCATGGGCAAAGGTCAAGTGTGGTTAAATGGACAGAATCTTGGCCGCTACTGGCCTGCTTATAAAGCATCTGGTACTTGTGATTACTGTGACTATGCTGGAACTTATAACGAGAATAAATGCAGAAGTAACTGTGGCGAGGCTTCTCAAAGATGGTATCACGTTCCTCAATCATGGCTAAAGCCAACAGGAAATTTATTGGTTGTGTTTGAAGAGCTAGGTGGAGACCTCAATGGAATCTCTTTGGTTAGAAGGGATATAGATAGTGTATGTGCAGATATTTATGAGTGGCAGCCAAATCTTATAAGCTATCAGATGCAAACTTCTGGCAAAGCACCTGTTAGACCAAAAGTTCATTTATCATGTAGCCCTGGACAGAAAATCTCATCAATCAAATTTGCTAGCTTTGGTACTCCAGTAGGTTCTTGTGGAAACTTCCATGAAGGAAGCTGCCATGCTCACATGTCTTATGATGCCTTTGAAAGGAATTGTGTTGGACAGAACTTGTGCACAGTAGCTGTGTCACCTGAAAATTTTGGAGGAGATCCATGTCCAAATGTCTTGAAGAAACTCTCAGTGGAAGCTATTTGTTCCTGA 2526 0.4252 MVMCLKLKLIMWNVALLLAFSLIGSAKASVSYDSKAITINGQRRILISGSIHYPRSTPEMWPDLIQKAKDGSLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFIKLVQQAGLYVHLRIGPYVCAEWNFGGFPVWLKYIPGISFRTDNEPFKVQMQKFTTKIVDLMKAERLYESQGGPIIMSQIENEYGPMQYEIGAAGKAYTKWAAEMAMELGTGVPWIMCKQDDTPDPLINTCNGFYCDYFSPNKAYKPKMWTEAWTGWFTEFGGPVPHRPAEDLAFSVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHRAIKLCEPALVSGDPTVTKIGNYQEAHVFKSMSGACAAFLANYNPKSYATVAFGNMHYNLPPWSISILPDCKNTVYNTARVGSQSAQMKMTRVPIHGGLSWLSFNEETTTTDDSSFTMTGLLEQLNTTRDLSDYLWYSTDVVLDPNEGFLRNGKDPVLTVFSAGHALHVFINGQLSGTAYGSLEFPKLTFNEGVKLRTGVNKISLLSVAVGLPNVGPHFETWNAGVLGPISLSGLNEGRRDLSWQKWSYKVGLKGETLSLHSLSGSSSVEWIQGSLVSQRQPLTWYKTTFDAPDGTAPLALDMNSMGKGQVWLNGQNLGRYWPAYKASGTCDYCDYAGTYNENKCRSNCGEASQRWYHVPQSWLKPTGNLLVVFEELGGDLNGISLVRRDIDSVCADIYEWQPNLISYQMQTSGKAPVRPKVHLSCSPGQKISSIKFASFGTPVGSCGNFHEGSCHAHMSYDAFERNCVGQNLCTVAVSPENFGGDPCPNVLKKLSVEAICS* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3602 841 Gene3D - 745 841 IPR043159 -
Gso11g3602 841 Pfam Galactose binding lectin domain 763 840 IPR000922 GO:0030246
Gso11g3602 841 SUPERFAMILY (Trans)glycosidases 30 346 IPR017853 -
Gso11g3602 841 Gene3D - 598 734 - -
Gso11g3602 841 PRINTS Glycosyl hydrolase family 35 signature 40 57 IPR001944 GO:0004553|GO:0005975
Gso11g3602 841 PRINTS Glycosyl hydrolase family 35 signature 61 79 IPR001944 GO:0004553|GO:0005975
Gso11g3602 841 PRINTS Glycosyl hydrolase family 35 signature 116 135 IPR001944 GO:0004553|GO:0005975
Gso11g3602 841 PRINTS Glycosyl hydrolase family 35 signature 173 188 IPR001944 GO:0004553|GO:0005975
Gso11g3602 841 PRINTS Glycosyl hydrolase family 35 signature 252 267 IPR001944 GO:0004553|GO:0005975
Gso11g3602 841 PRINTS Glycosyl hydrolase family 35 signature 289 304 IPR001944 GO:0004553|GO:0005975
Gso11g3602 841 PRINTS Glycosyl hydrolase family 35 signature 309 325 IPR001944 GO:0004553|GO:0005975
Gso11g3602 841 PRINTS Glycosyl hydrolase family 35 signature 620 634 IPR001944 GO:0004553|GO:0005975
Gso11g3602 841 PRINTS Glycosyl hydrolase family 35 signature 647 663 IPR001944 GO:0004553|GO:0005975
Gso11g3602 841 Pfam Glycosyl hydrolases family 35 37 341 IPR031330 -
Gso11g3602 841 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 175 187 IPR019801 GO:0004553|GO:0005975
Gso11g3602 841 ProSiteProfiles SUEL-type lectin domain profile. 755 841 IPR000922 GO:0030246
Gso11g3602 841 PANTHER BETA-GALACTOSIDASE 14 835 - -
Gso11g3602 841 SUPERFAMILY Galactose-binding domain-like 404 575 IPR008979 -
Gso11g3602 841 Pfam Beta-sandwich domain in beta galactosidase 349 420 IPR041392 -
Gso11g3602 841 Gene3D Glycosidases 24 345 - -
Gso11g3602 841 SUPERFAMILY Galactose-binding domain-like 584 749 IPR008979 -
Gso11g3602 841 PANTHER BETA-GALACTOSIDASE RELATED 14 835 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3602 Gso-Chr11 51695031 51701579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3602 15 841 Glycoside Hydrolase AT3G13750 79.855 0.0 1419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3602 - - gmx:100787084 1748.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0212 15 1909479 1915947 Gso11g3602 11 51695031 51701579 GST
Gso11g3602 11 51695031 51701579 Gso7g0088 7 778850 785270 PCT
Gso11g3602 11 51695031 51701579 Gso8g1602 8 15666337 15673005 PCT
Gso7g0088 7 778850 785270 Gso11g3602 11 51695031 51701579 PCT
Gso8g1602 8 15666337 15673005 Gso11g3602 11 51695031 51701579 PCT