Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3457 ATGGCAACGGATTCTTCTAATGGTAATGGACATCACCAAACAACAACAAAGCAACCTCCTTTGCCGTCTCCCCTGCGCTTTTCCAAATTTTTTCAGTCCAACATGAGAATCTTGGTTACTGGAGGAGCTGGATTCATTGGGTCTCACTTAGTTGACAGATTGATGGAAAATGAAAAAAATGAGGTAATTGTTGCTGACAACTACTTCACTGGATCCAAGGACAACCTCAAAAAATGGATAGGTCATCCAAGATTTGAGCTTATCCGTCATGATGTCACGGAGCCTTTATTGATCGAGGTTGATCAGATCTACCATCTTGCATGCCCTGCCTCTCCTATTTTCTACAAATACAATCCAGTAAAGACAATAAAGACAAATGTGATTGGCACACTGAACATGCTTGGGCTTGCAAAGCGAGTAGGAGCAAGGATTTTGCTTACATCAACTTCAGAGGTATATGGGGATCCTCTTGTGCATCCCCAACCTGAAAGTTATTGGGGCAATGTTAACCCTATTGGAGTTCGTAGTTGCTATGATGAGGGGAAACGGGTGGCCGAGACATTGATGTTTGATTACCATAGGCAGCATGGGATTGAAATACGCATTGCAAGAATCTTTAACACATATGGACCACGCATGAATATTGATGATGGGCGTGTTGTTAGCAACTTCATTGCTCAAGCACTTCGGGGGGAACCATTGACAGTCCAATGTCCAGGAACACAAACTCGAAGTTTCTGCTATGTCTCTGACCTGGTTGATGGCCTTATCCGTCTCATGGGAGGATCAAACACCGGACCAATCAACCTTGGAAACCCAGGTGAATTTACAATGACTGAACTTGCTGAGACCGTGAAAGAGCTTATTAATCCAGGTGTGGAGATCAAGATGGTGGAGAACACTCCTGATGATCCGCGACAAAGAAAACCAGACATCACAAAAGCAAAGGAATTGTTGGGCTGGGAGCCAAAGGTCAAGTTGCGTGATGGTCTTCCTCGTATGGAAGAGGATTTCCGTCTGAGGCTTGAAGTTGGCAAAAAGAATTAA 1047 0.4403 MATDSSNGNGHHQTTTKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQCPGTQTRSFCYVSDLVDGLIRLMGGSNTGPINLGNPGEFTMTELAETVKELINPGVEIKMVENTPDDPRQRKPDITKAKELLGWEPKVKLRDGLPRMEEDFRLRLEVGKKN* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3457 348 Pfam GDP-mannose 4,6 dehydratase 38 334 IPR016040 -
Gso11g3457 348 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 348 IPR044516 GO:0042732|GO:0048040|GO:0070403
Gso11g3457 348 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 348 - -
Gso11g3457 348 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 30 339 IPR036291 -
Gso11g3457 348 CDD UGD_SDR_e 35 339 - -
Gso11g3457 348 MobiDBLite consensus disorder prediction 1 23 - -
Gso11g3457 348 Gene3D - 34 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3457 Gso-Chr11 50476771 50481305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3457 37 347 Miscellaneous Gene Families AT4G00110 24.566 6.40e-18 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3457 K08678 - gmx:100782830 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0351 15 3172880 3177880 Gso11g3457 11 50476771 50481305 GST
Gso11g3457 11 50476771 50481305 Gso12g0535 12 4799620 4804295 PCT
Gso11g3457 11 50476771 50481305 Gso11g1197 11 10801798 10806690 PCT
Gso12g0534 12 4790472 4795456 Gso11g3457 11 50476771 50481305 PCT