Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0834 ATGTTCCAGCGAAGAAAAAAGGAACACGGTCATAGTACCTTGCCACTTTCCACCACCTCAGACTTAGACAACACAGCAACAGCAATGCCTCCTCTTCCCACCATCAGAACCAAAACACCTTCCTTCAAATCCTTCCTCTTAACCCTATCTATCCTCCTCAACCTCTTCCTCCTGTGGGCCCCACCCAACTCCTCATCACCATCACTGCCCTCATCCACGTCCGCCCTCATCTCCCGCCTCTCCCCCACCACGCGCCGCCACCTCCTCTTCTCCGTCGCCTCCTCCTCCACCTCCTGGCCCCGCCGCCTCCCCTACATCAACCTCTGGTACTCCCCCGCCACCACCCGCGCCCTCGCATTCCTCGACAAAACACCACCCAACGCCACCTCAGCCGACGATTCCTCGCCGCCGTTGGTGATCTCCGGCGACACCTCCTCTTTCCCCTACACGTTCCGCGGCGGGCTGCGGTCCGCCATCCGCGTGGCGCGTGCCGTGAAGGAGGCCGTGGATCGCAACGAGACGGACGTGCGGTGGTTCGTGTTCGGCGACGACGACACTGTGTTCTTCGTCGACAACGTGGTGAGGGCGCTCGCGAGGTACGATCATAGCAAGTGGTTCTACGTCGGGAGCAACTCCGAGAGCTACGAGCAGAACGTGAAGTACTCGTTCGAGATGGCGTTTGGAGGTGGTGGCTTCGCGATCAGCTACTCGCTTGCTAGGGTTTTGGCGAGGGTTTTGGACTCGTGTTTGAGGAGGTATGGCCATTTGTATGGAAGCGATTCGAGGATTTATTCTTGCATTGCTGAGCTTGGTGTTGCGTTAACTCACGAACCTGGATTTCATCAGTTAGATATGCGGGGGAACTTGTTCGGGATGCTGGCTGCTCATCCATTATCTCCGTTATTGTCACTTCATCACTTGGAATCAGTGGAGCCCCTTTTCCCGGACATGAACAGAGTACAAGCTTTGGAACATCTTATTGCAGCTGCAAATGTAGATCCTGCCAGGATCCTGCAGCAAACTGTCTGCTATGATCGATCAAATTCTTTGACCTTCTCGGTTTCTTGGGGTTTTGCTATCCAGGTTTATCAAGGAAATGAACTTCTACCTGACCTCCTTTCACTGCAGAGAACTTTTGTGCCATGGAAGAGGGGTAGTAAAGTTAATGCCAATTTTATGTTTAACACCAGAGACTATCCTAGAGATCCTTGTAAAAGGCCTTCTATATTTTTCTTTAAAAGTGTTGCATCTGATAAAAGGGGCATTTGGAGCAATTACAGTGGACATGTTGTTGGGAACTGCTTTGAATCTACACTGCTCAAGCAGATCATAGTTTTTTCAAAGAAGCTGGAGCTTAATAATGAACAGATGATTGCTCCCCGCCGTCAGTGCTGCAATGTATTGCTGACCTCTAATGATACAGTCAGTCTTCATATTAGACAGTGTGAACTTGATGAACTGATCTCCATGCAACCCTAG 1479 0.5145 MFQRRKKEHGHSTLPLSTTSDLDNTATAMPPLPTIRTKTPSFKSFLLTLSILLNLFLLWAPPNSSSPSLPSSTSALISRLSPTTRRHLLFSVASSSTSWPRRLPYINLWYSPATTRALAFLDKTPPNATSADDSSPPLVISGDTSSFPYTFRGGLRSAIRVARAVKEAVDRNETDVRWFVFGDDDTVFFVDNVVRALARYDHSKWFYVGSNSESYEQNVKYSFEMAFGGGGFAISYSLARVLARVLDSCLRRYGHLYGSDSRIYSCIAELGVALTHEPGFHQLDMRGNLFGMLAAHPLSPLLSLHHLESVEPLFPDMNRVQALEHLIAAANVDPARILQQTVCYDRSNSLTFSVSWGFAIQVYQGNELLPDLLSLQRTFVPWKRGSKVNANFMFNTRDYPRDPCKRPSIFFFKSVASDKRGIWSNYSGHVVGNCFESTLLKQIIVFSKKLELNNEQMIAPRRQCCNVLLTSNDTVSLHIRQCELDELISMQP* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0834 492 PANTHER GLYCOSYLTRANSFERASE 37 490 - -
Gso12g0834 492 Pfam Protein of unknown function, DUF604 217 465 IPR006740 -
Gso12g0834 492 MobiDBLite consensus disorder prediction 13 33 - -
Gso12g0834 492 PANTHER FRINGE-RELATED 37 490 - -
Gso12g0834 492 Gene3D - 78 336 - -
Gso12g0834 492 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0834 Gso-Chr12 9005874 9010429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0834 83 491 Glycosyltransferase AT4G15240 63.923 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0834 - - gmx:100813277 940.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0834 12 9005874 9010429 Gso12g0834 12 9005874 9010429 ECH
Gso12g0834 12 9005874 9010429 Gso11g3208 11 47861935 47864280 PCT