Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3051 ATGATTGATGGTGAATTCGAGGAATCATTGATCATTATTGTGTTGTGGATAAGTGCTATTTTGGTGTGTTTGGTGATGGGGATGAGGAATGATGCACAGAAGCAACAGCTTCTTCATCAGGGTAATGGTGGTGGCAGAACCAATGGTTTCATTCCAAGTTCTTTCCGTGCTCTCTCTAGCTACCTCAGAGTTGTTTCCTCTGGTGCTTCTACTGTTGCACGTTCTGCTGCATCGGTTGCATCATCGATTGTGGAGAGGGATGATGACCCTGACCATGATCAGGTTATCTGGGCTGGGTTTGACAAGTTAGAGGGTGAGGGTGAAGTTATTCAGCAAGTACTTCTTCTAGGCTATCGATCTGGATTCCAGGTTTGGCATGTCGATGAATCAAATAATGTCCGAGACCTGATTTCCCGACATGATGGTCCTGTTTCTTTTATGCAAATGGTCCCTAATCCAATTGCATCAAAGAGATCACAAGACAAGTATGCAAACAGCCGCCATCTGTTGGTAGTTTGTACTGATGGGTTCTTTGCTGGAGGTAACAATGTTCAGGGTGGGTCAACCATCCCTTACAATGGGAGCACTTCAAACTCCCATGACCAAATAAATGGAAACTATCTGCCAACTACCGTTCGGTTTTATTCTATGAAATCCCAATCATATGTTCATGTACTGAAGTTTAGATCAGTTATTTATTCTGTGAGGTGCAGTTCTCGAGTCGTGGCAGTTTCTCAATCCACTCAGATACACTGTTTTGATGCTACAACATTAGAAAGGGAATATACTTTACTTACCAATCCTATAGTAATGAGTTGCCCTGGTTCTGGAGGCATAGGATATGGACCACTTGCGGTGGGACCAAGATGGCTTGCATATAGTGGAAGTCCAATTGCAATCTCCAACTCAGGACATGTGTGTCCACAACAGTTGACACCTTCCGCAAGGTTTCCTGGTTTTTCTTCTAATGGGAGATTGATTGCACATTATGCGAAAGAGTCCAGCAAGCATCTTGCTTCTGGGATTGTGACCCTTGGAGACATGGGGTATAAGAAACTTTCCAGATATTGCTCTGATAGCAATGGTTCATTACAATCTGTAAATTCTGGCTCTAAGGGCAATGGAACCGTTAATGGCCATTCAACAGATGCAGATAACATTGGAATGGTTATTGTTAAAGATATTGTCTCGAAAGATGTTATTGCCCAATTCCTTGCCCACAAGAGTCCTATTTCAGCATTGTGCTTTGATCCTAGTGGCACCATTTTAGTGACAGCTTCCATTCAGGGTCATAATATAAATGTTTTCAAGATAATGCCTGCAAGTGGGACTTTGTCAGCTTCTGTTGTTGGTCGTTCTTATGTTCATTTGTACAGGTTGCAACGTGGCTTTACAAATGCGGTTATACAAGATATCAGTTTCAGTGATGACAGCAAGTGGATTATGATTAGTTCTTCAAGGGGAACTAGCCATCTATTTGCCATAAATCCTCAAGGAGGACATGTAAATATTCAGCCCTTTGATGATAGTTTTACAGCAAAAAATAGTGGATTAGGCACTACAACTAATCATGCAGTTTGTCAGTCTCATAGTTCGGCCATGCAAATGCCTAAACAGCAGAGCCTGTTTGCTACTGGCCCTCCGATCACACTTTCTGTTGTAAGCAGAATTAGGAATGGAGCTAATGGCTGGAGAGGCACCGTAAGTGGTGCTGCTGCAGCTGCAACTGGTAGGAAAAATGCCCTTTCTGGGGCTATTGCTTCATCTTTCTGTAACTATAAAGGCAATGAAGGCAACTTTTCCAAGGCAAAGTATCAACTGTTGGTCTTTTCACCCACTGGTTCCATGGTACAATATGCTCTGAGGACAATAACTGGTCAAGATTCAGCTGTTGTTTCTGGATTGTCCCCTGCTTATGAATCCATTCCACAGGCTGATACAAGATTAGTTGTTGAGGCTATCCATAAATGGAATATATGTCATATTCGGAGAGAGCGAGAAGATAATGTAGACATATATGGTGAGAATGGAATTTCAGACGTTAATAAAATATATCCAGAGGAAGTGAGGGAGAAGATAGACACCATTAGCCCAAAAATCAAGAATGGAGTCATGAAAGTGAATCCCTGTCTTGAGGAGGAGCATCATTTGTATATTTCAGAAGCTGAACTGCAAATGCATCAAGCTCAGACTCCGTTGTGGGCAAAGCCAGAGATATATTTTCATTCAATGTTGCAAGAATCTACCATAATGGATGAAGAAGCAGCTGCTTCAGGAGGTGAATTTGAGATTGAAAGGATTCCAACTTGCATGATCGAAGCTAGATCAAAGGACTTGGTTCCAATTTTCGACTATATTCAGACTCCAAAAGTACAACAAAAAAGGATTCCTGCTATGGATGGCAAGACAAATGAACAACTGTTACATTACAGTTCTAGTCAGGTGGCCGGAAATGGCAGGATTTCACCCAGGACTATTTTGGAATCCCCTGAGTGTGTGACTAATGCTGGTGATGCTGTTTCTGAATTTAGAAGTGGGATTGAAGGAACTGAGTGGGATAATCATGTGGTGCCATCCGAAACCGTGAACTTTGTAAATAACAATGACACCTTTAGACAAAATACTCAGCATGAGATTGTAAATAATAGAATGGAGCACTTAAACACCGGGGCTCATCTCATGTATGTAAATAGTGACGGAAAGCCTGAAAATGAAGAATCATTTTGA 2727 0.4177 MIDGEFEESLIIIVLWISAILVCLVMGMRNDAQKQQLLHQGNGGGRTNGFIPSSFRALSSYLRVVSSGASTVARSAASVASSIVERDDDPDHDQVIWAGFDKLEGEGEVIQQVLLLGYRSGFQVWHVDESNNVRDLISRHDGPVSFMQMVPNPIASKRSQDKYANSRHLLVVCTDGFFAGGNNVQGGSTIPYNGSTSNSHDQINGNYLPTTVRFYSMKSQSYVHVLKFRSVIYSVRCSSRVVAVSQSTQIHCFDATTLEREYTLLTNPIVMSCPGSGGIGYGPLAVGPRWLAYSGSPIAISNSGHVCPQQLTPSARFPGFSSNGRLIAHYAKESSKHLASGIVTLGDMGYKKLSRYCSDSNGSLQSVNSGSKGNGTVNGHSTDADNIGMVIVKDIVSKDVIAQFLAHKSPISALCFDPSGTILVTASIQGHNINVFKIMPASGTLSASVVGRSYVHLYRLQRGFTNAVIQDISFSDDSKWIMISSSRGTSHLFAINPQGGHVNIQPFDDSFTAKNSGLGTTTNHAVCQSHSSAMQMPKQQSLFATGPPITLSVVSRIRNGANGWRGTVSGAAAAATGRKNALSGAIASSFCNYKGNEGNFSKAKYQLLVFSPTGSMVQYALRTITGQDSAVVSGLSPAYESIPQADTRLVVEAIHKWNICHIRREREDNVDIYGENGISDVNKIYPEEVREKIDTISPKIKNGVMKVNPCLEEEHHLYISEAELQMHQAQTPLWAKPEIYFHSMLQESTIMDEEAAASGGEFEIERIPTCMIEARSKDLVPIFDYIQTPKVQQKRIPAMDGKTNEQLLHYSSSQVAGNGRISPRTILESPECVTNAGDAVSEFRSGIEGTEWDNHVVPSETVNFVNNNDTFRQNTQHEIVNNRMEHLNTGAHLMYVNSDGKPENEESF* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3051 908 SUPERFAMILY WD40 repeat-like 113 496 IPR036322 GO:0005515
Gso11g3051 908 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 28 884 IPR045142 GO:0006914
Gso11g3051 908 SMART WD40_4 453 494 IPR001680 GO:0005515
Gso11g3051 908 SMART WD40_4 397 437 IPR001680 GO:0005515
Gso11g3051 908 SMART WD40_4 219 254 IPR001680 GO:0005515
Gso11g3051 908 Pfam Breast carcinoma amplified sequence 3 546 781 IPR022175 -
Gso11g3051 908 Gene3D - 111 535 IPR015943 GO:0005515
Gso11g3051 908 PANTHER AUTOPHAGY-RELATED PROTEIN 18F 28 884 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3051 Gso-Chr11 46344968 46351768 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3051 - - gmx:100784596 1769.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1812 12 41843271 41849172 Gso11g3051 11 46344968 46351768 GST
Gso11g3051 11 46344968 46351768 Gso12g1128 12 15967650 15974950 PCT
Gso11g3051 11 46344968 46351768 Gso6g2216 6 42803127 42808884 PCT
Gso12g1128 12 15967650 15974950 Gso11g3051 11 46344968 46351768 PCT
Gso6g2216 6 42803127 42808884 Gso11g3051 11 46344968 46351768 PCT