Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2034 ATGGCCAAAAGCAAAAACTGTCATGCTTTGCCTCTTCTCCTTGCCCTGATCCTCTTCTTCACTCTTCTTGGAACCTCTCACGCAGGTGGCATAGCCATCTACTGGGGGCAAAATGGTAACGAGGGCACCCTCTCAGAAGCATGTGCAACAGGCAAATACACCCACATAAACATAGCCTTTCTCAACAAATTCGGCAATGGCCAAACCCCAGAAATGAACCTGGCTGGTCACTGCAACCCCGCAACCAATTCCTGCACAAAGTTCAGCTCCGAAATCAAGGACTGCCAAAGCAAAGGGATCAAGGTGTTACTTTCAATAGGTGGTGGCATTGGAAGCTACACTTTGGCTTCAGTAGAAGATGCAAGAAACGTTTCAACTTTTCTGTGGAACACTTTCTTGGGAGGCAAGTCATCATCATCTTCAAGGCCACTAGGTGATGCTGTGTTGGATGGCATAGACTTTGACATTGAACTTGGTTCAACACAAAACTATGAGCACCTTGCACGTTTTCTTAAGGCGTATAGTGGGGTTGGCGGGAAGAGGGTGTACCTAGGTGCTGCTCCTCAGTGTCCAATTCCTGATAGATTTTTGGGCACTGCCCTTAACACTGGCCTTTTTGACTTTGTTTGGGTTCAGTTCTACAATAACCCTCCGTGTCAGTATGCTAATGGGAACATAACTAACCTTGTGAGTTCTTGGAACCGGTGGACTAGTACGGTGCCTGCCGGGAAGATATTTTTAGGGTTGCCGGCCGATCCGGCCGCCGCTGGCAGCGGTTTCATTCCGGCTGACACGTTGACTTCTCAGATCCTGCCTGTGATTAAGGAGTCGCCAAAATATGGTGGGGTGATGCTGTGGTCAAGATTCTTTGATGTCCAGAACGGGTATAGTACTTCAATTATTGGCAGCGTGTGA 915 0.482 MAKSKNCHALPLLLALILFFTLLGTSHAGGIAIYWGQNGNEGTLSEACATGKYTHINIAFLNKFGNGQTPEMNLAGHCNPATNSCTKFSSEIKDCQSKGIKVLLSIGGGIGSYTLASVEDARNVSTFLWNTFLGGKSSSSSRPLGDAVLDGIDFDIELGSTQNYEHLARFLKAYSGVGGKRVYLGAAPQCPIPDRFLGTALNTGLFDFVWVQFYNNPPCQYANGNITNLVSSWNRWTSTVPAGKIFLGLPADPAAAGSGFIPADTLTSQILPVIKESPKYGGVMLWSRFFDVQNGYSTSIIGSV* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2034 304 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 29 304 IPR001223 GO:0005975
Gso10g2034 304 SUPERFAMILY (Trans)glycosidases 26 300 IPR017853 -
Gso10g2034 304 CDD GH18_hevamine_XipI_class_III 29 302 IPR045321 -
Gso10g2034 304 Pfam Glycosyl hydrolases family 18 31 289 IPR001223 GO:0005975
Gso10g2034 304 Gene3D Glycosidases 29 303 - -
Gso10g2034 304 PANTHER ACIDIC ENDOCHITINASE 8 304 - -
Gso10g2034 304 PANTHER ENDOCHITINASE 8 304 - -
Gso10g2034 304 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 149 157 IPR001579 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2034 Gso-Chr10 47367807 47368959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2034 8 304 Glycoside Hydrolase AT5G24090 63.636 7.78e-145 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2034 K01183 - gmx:100818728 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2034 10 47367807 47368959 Gso10g2034 10 47367807 47368959 ECH
Gso20g1325 20 43295506 43296719 Gso10g2034 10 47367807 47368959 GST
Gso16g1417 16 34155589 34157150 Gso10g2034 10 47367807 47368959 PCT
Gso9g1028 9 29426807 29428511 Gso10g2034 10 47367807 47368959 PCT
Gso10g2034 10 47367807 47368959 Gso16g1417 16 34155589 34157150 PCT
Gso10g2034 10 47367807 47368959 Gso9g1028 9 29426807 29428511 PCT