Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0339 ATGGGTTGCTTTTTCGGTTGTTTTGGTTCCTCCAAACATAGAAACCACAAGCACAAGGTTCAAAGAAATGATAGTAGCAATAGCAAGCAAGAGCAACATAGTGTCTCTTTGGTTCATGGTTGCTCCACAAATGCTATTAACCCTATACCCCAACTCCAGGATGAAAGTGAGGAGCAACTAAGTGTTAGCAGCAGAAAGAAAGTGACATTTGATTCCAATGTGAAGACCTATGAGCCTGTTTTAGCGGATGAAGTTGTGGAGAGGAAAAATGAGCAAGCTTTGGCCCAACCAAAGTCATCTTCCTCTGAAGATAGTTCTGTGACTTCAACGGGGTCGAACCCTCCCAACCATAGGTACCAGAATTGCCGCGACAGTGACGATGAGGAGGAAGAGATTGATTATGGAGACAGTGATCTTAGTGATGGTGATGAGGATGATGATGATGCCATCAAAGAAGAATGCAATGAAGTGAGTGAGGACTTTGGGGAAGATGGCATAGTGGCAACTACTGTTTCTGATGATCATGTGTTTGTTGAAGAAGAGGTTAGTGTGAAGTCCATTGGGTCCAACCCTAATGTGAGAGACAGAAGTGCTTATGTTCATCCTGTGCTGAATCCAGTGGAGAATCTCACTCAGTGGAAAGTTCTTAAGGCTAAGAGAACACCAATAAGGCCTCAGAAAGAGAATGATTTTGGGGTTGGTGTCAAAGGATCACCTTTCAGCTTGAATTATTCCGAAAGCGACACACCGAAGAAGTTGAACCGGGAGATCCGAGTTGATGCCAGCCTGTCAAATTGGTTGGTCTCACCAGAAACTACACCTGTTATTAGCAAGGCTGGCTCAGTGGCATCCTTTGCTGGTACCCCTGATAGGAGCACCTCACAGGGTTCATATTCTGTGATAAGTCATGAAGATAGGCCCATTTTAGGGGCATTGACATTGGAAGAGATCAAACAGTTCTCGGCTACTTCGTCTCCACGGAAGTCACCAAGTAGGAGTCCAGATGAGATGCCTATTATTGGCACTGTTGGAACCTACTGGAATGCTGCAGGCTCTGCTGAGGATCCTGGCTCAGTCTCTTCCTTTAAAGGAATTCCGAACTCAACAAGCAAGTACAGAGAGGATAAGAGAGTGAATTGGCACTCAACCCCTTTTGAGACAAGATTAGAGAAGGCTTTGAATAGAGGTGCTTCTTCTGCTTATGTTCCTCGTGTATTTTAG 1221 0.448 MGCFFGCFGSSKHRNHKHKVQRNDSSNSKQEQHSVSLVHGCSTNAINPIPQLQDESEEQLSVSSRKKVTFDSNVKTYEPVLADEVVERKNEQALAQPKSSSSEDSSVTSTGSNPPNHRYQNCRDSDDEEEEIDYGDSDLSDGDEDDDDAIKEECNEVSEDFGEDGIVATTVSDDHVFVEEEVSVKSIGSNPNVRDRSAYVHPVLNPVENLTQWKVLKAKRTPIRPQKENDFGVGVKGSPFSLNYSESDTPKKLNREIRVDASLSNWLVSPETTPVISKAGSVASFAGTPDRSTSQGSYSVISHEDRPILGALTLEEIKQFSATSSPRKSPSRSPDEMPIIGTVGTYWNAAGSAEDPGSVSSFKGIPNSTSKYREDKRVNWHSTPFETRLEKALNRGASSAYVPRVF* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0339 406 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 1 397 IPR039300 GO:0007142
Gso10g0339 406 MobiDBLite consensus disorder prediction 10 164 - -
Gso10g0339 406 MobiDBLite consensus disorder prediction 27 58 - -
Gso10g0339 406 MobiDBLite consensus disorder prediction 126 160 - -
Gso10g0339 406 MobiDBLite consensus disorder prediction 93 119 - -
Gso10g0339 406 PANTHER RRNA BIOGENESIS PROTEIN RRP36 1 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0339 Gso-Chr10 3604323 3606290 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0339 - - gmx:100805024 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1390 19 42735953 42737975 Gso10g0339 10 3604323 3606290 PCT
Gso3g1396 3 39921565 39923634 Gso10g0339 10 3604323 3606290 PCT
Gso19g2085 19 49372732 49374606 Gso10g0339 10 3604323 3606290 PCT
Gso3g2128 3 46544052 46546165 Gso10g0339 10 3604323 3606290 PCT
Gso10g0339 10 3604323 3606290 Gso19g1390 19 42735953 42737975 PCT
Gso10g0339 10 3604323 3606290 Gso3g1396 3 39921565 39923634 PCT