Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1396 ATGGGTTGTTTTCTTCATTGCTTTGGTTCCTCCAAAAGCACAAAACCTAGGCGCAAGGCACAACATCACCACCATCGAATTGCTAGAGACAGGTTGGAGCAACCTACGGCGTGTTGTTCTGTTCAGGATTACTCCGAAACAGTGGTACTTAGCACTGCATCACAAGAAGTCCAGGCTAAACCTTTGGAGCAGATAAACGTGAGCCCTAAAAAGAAAGTAACTTTTGATGTCAATGTGAAAACGTACGAGCCCGAGCCTGATGAAGTTGCTGATTACCAACTTGAGAGAAGTGAAGAGGGTAGAGAGGAAAGTGCTTTTGTTGAAAAGTTAAGCCAAACAAAGTCTTACTCTGAAGTAAGTTCGGTGACTTCAGCGAGGTCTTACCCTACAAACCATAGGTACCACAGTTGCACGTGTAGTGATGATGAAGATGGAGCAATGGAGTATTGGGATAGTGATGTTACTGATGAGGATGAGGATGAGGATGATGATGGTGATAGTGACATGGGAGAAGAGTATGATGAAGTGGAAGAGGATTTTGAAGATGGAATAGTGTACTCAAGGTCAAGAAATGGTGCTAATCAAGTGGTTGTTGGAGAGGTGGAAAGTCCAATTCCAATGCATGATAAGGATCTGAAGTCAATTGGGTTGAACTCCAATGTTCGAGATAGGAGTGTGTATGTTAATCCTTTGCTGAACCCTGTGGAGAACCTCACTCAATGGAAAACAGTTAAAGCTAAAAGGGCACCCCCATTGGTGTCTCAGAAGGAGAATTTGGTTTTGAATCAAGAGTCTAGAGCTGCATTTGGAGCAGAAACAGAAACACCAAAGAAGTTGAACCGGGAAATTGCAGTTGATGCTAGCCTTTCGAATTGGTTGGGTTCATCAGAAACTACACCTGTTGTTAGCAAGGGTTTGTATGCGGGTACCCCGGAGAGGAGCAGCAGCAGTTCACAAGGCTCAAATTCAGTGGTGAGCCATGAAGATAGGCCTATTTTAGGTGCATTGACAGTTGAAGAGCTCAAACATTTTTCGGCTTCTTCTTTGCCAAGAAAATCACCAAGGGATGAGATGATGCCCATTATAGGCAGTGTTGGGAGCTACTGGAATTGTGGGGGCTATGCTGAGGATTCTGGCTCAGCAAACCGAGTAAGATCAAGAAAAGGGTACATTTGA 1176 0.4413 MGCFLHCFGSSKSTKPRRKAQHHHHRIARDRLEQPTACCSVQDYSETVVLSTASQEVQAKPLEQINVSPKKKVTFDVNVKTYEPEPDEVADYQLERSEEGREESAFVEKLSQTKSYSEVSSVTSARSYPTNHRYHSCTCSDDEDGAMEYWDSDVTDEDEDEDDDGDSDMGEEYDEVEEDFEDGIVYSRSRNGANQVVVGEVESPIPMHDKDLKSIGLNSNVRDRSVYVNPLLNPVENLTQWKTVKAKRAPPLVSQKENLVLNQESRAAFGAETETPKKLNREIAVDASLSNWLGSSETTPVVSKGLYAGTPERSSSSSQGSNSVVSHEDRPILGALTVEELKHFSASSLPRKSPRDEMMPIIGSVGSYWNCGGYAEDSGSANRVRSRKGYI* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1396 391 MobiDBLite consensus disorder prediction 303 328 - -
Gso3g1396 391 PANTHER RRNA BIOGENESIS PROTEIN RRP36 1 382 - -
Gso3g1396 391 MobiDBLite consensus disorder prediction 303 326 - -
Gso3g1396 391 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 1 382 IPR039300 GO:0007142
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1396 Gso-Chr3 39921565 39923634 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1396 - - gmx:100787541 753.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1390 19 42735953 42737975 Gso3g1396 3 39921565 39923634 GST
Gso3g1396 3 39921565 39923634 Gso10g0339 10 3604323 3606290 PCT
Gso10g0339 10 3604323 3606290 Gso3g1396 3 39921565 39923634 PCT