Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2085 ATGATGAGGTGCTTTCTACCTTGCTTTCGTACTTCTAAACGGAGGAACCACTTGCGTTCCGCCGATGAAGCCCAAAACCATGTGGGAGAAGGAGCTGTTGAAGAACTCATTGATTCCATAGCAGAGTCAAAAACAAAAAATGAAGAGCAATTGAATAAGAGTGTTGAAACCAAGGATGATCGGAAAGAGGAAGCACCTCAAATAGATGAGACAAATAAAAGATCGCATCAAGAAGAGTCTTCGGAGTCACTGTTCTCTCTCTCCATTTCTTCTAGGAAAAAAGCTTCAGATGCCGAGCCTGAAGTTAACAGTCCTATTCGACTCGTATGCACAAAAGAAGCATTTGGGTCATCCCCAAGTGTTGAAGAAAGGAAGCCATCAGAGAACACCAAGCAACCAAGTTTCAATGCCATAAAGAAGGAAGAAGAAACCAAGGAATTAATCAAGAATGAAGGTGAAAAAGAGAAAGCGAATGACCCCGTCACTCAGTATAGATATCGAGATTGCCCTGATGACGGGTACGACGATATTAATTTAAATGTTAATGATTTGGATGCTACACTTAAAGATGATGATGATGATCCTCCCAGTGAGAAGAAAGGGGAAGCAGGCGCTGATGTTAACCAAACATGGGTTCAAGAAGAGTCCTCAGAATCTTTCTTTTCTCTGTCCGCTAATTCTAGAATACGAATTTCATCAGCTGAAGCGGAGAATGAAGTTAACAGTCAAATGTCAGCCCCTGCTACAAACAGCATCACACAAGGAAAGATTCCAGATCTTTCCTTAGTGCTGAATCCAATTCAGAATCTTACCAAAGGGAGGGTAGTCAAAGCAACCCTGAAGAATGATAAAGAAAACATCAACATGGTAGTGAAAGATATCAACATACCCATTAGTCCAGAGCCTAGTTTGAAGCTGTCAAACCGCAAGGCAAAGCAGAGGTTCGATGACAAAATTGGGGTAGACACCAGCCTCTCGAGCTGGTTGGTTGAATCATCGGAAACCACACCAATTTCCATCAACAATACCAGTTCTGTGGGAGAACAAACACCAAAAGGAAGAAGAGGCTCACCATGGAGTCGCGAGGATAGGCCAATTTTAGGAGCATTAACCGTTGAAGAGATCAGGATGTTTTCTTTATCTGCATCTTCAAGAAGGTCTAGAAGCCGGAGTCCTGACGAGACACCCATAATAGGTACTGTTGGGAGCTATTGGAGTCACACAGAGCAGACCATGGATTTAGAATTCAACAAAAGTGGAAAGGATGTGAAACCAAAGAGGAGTTCAACTGCATTGCAGACCAGACTAGAAAGAGCGTTTGAAGCCAGTGCTGCAGAAGTTTGA 1344 0.4278 MMRCFLPCFRTSKRRNHLRSADEAQNHVGEGAVEELIDSIAESKTKNEEQLNKSVETKDDRKEEAPQIDETNKRSHQEESSESLFSLSISSRKKASDAEPEVNSPIRLVCTKEAFGSSPSVEERKPSENTKQPSFNAIKKEEETKELIKNEGEKEKANDPVTQYRYRDCPDDGYDDINLNVNDLDATLKDDDDDPPSEKKGEAGADVNQTWVQEESSESFFSLSANSRIRISSAEAENEVNSQMSAPATNSITQGKIPDLSLVLNPIQNLTKGRVVKATLKNDKENINMVVKDINIPISPEPSLKLSNRKAKQRFDDKIGVDTSLSSWLVESSETTPISINNTSSVGEQTPKGRRGSPWSREDRPILGALTVEEIRMFSLSASSRRSRSRSPDETPIIGTVGSYWSHTEQTMDLEFNKSGKDVKPKRSSTALQTRLERAFEASAAEV* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2085 447 MobiDBLite consensus disorder prediction 381 404 - -
Gso19g2085 447 PANTHER - 2 442 - -
Gso19g2085 447 Coils Coil 33 53 - -
Gso19g2085 447 MobiDBLite consensus disorder prediction 185 212 - -
Gso19g2085 447 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 2 442 IPR039300 GO:0007142
Gso19g2085 447 MobiDBLite consensus disorder prediction 116 164 - -
Gso19g2085 447 Coils Coil 138 158 - -
Gso19g2085 447 MobiDBLite consensus disorder prediction 39 80 - -
Gso19g2085 447 MobiDBLite consensus disorder prediction 124 164 - -
Gso19g2085 447 MobiDBLite consensus disorder prediction 39 104 - -
Gso19g2085 447 MobiDBLite consensus disorder prediction 338 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2085 Gso-Chr19 49372732 49374606 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2085 - - gmx:102662645 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2085 19 49372732 49374606 Gso19g2085 19 49372732 49374606 ECH
Gso20g1633 20 46866132 46867835 Gso19g2085 19 49372732 49374606 ECH
Gso19g2085 19 49372732 49374606 Gso3g2128 3 46544052 46546165 GST
Gso19g2085 19 49372732 49374606 Gso10g0339 10 3604323 3606290 PCT