Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1390 ATGGGTTGTTTTCTTCATTGCTTTGGTTCCTCCAAGAGCACAAAACCTAGGCGCAAGGCACACCATCACCATCGACTCGCTAGAGACAGGTTAGAGCAATGCTCTATTCAGGATTACTCCGAAACGGTGGTAATTGGCACTGCATCACAAGAAGTCCAGGCTAAACCTTTGGAGCAGATAAACGTGAGCCCCAAAAAGAAAGTAACTTTTGATGTCAATGTGAAAACGTACGAGCCTGATGAAGTTGCTGATTTCCAACTTGAGAAAAGTGAAGAGGGTGGAGAGGAAAGTGCTTTGGTTGAAAAGTTAAGCCGAACAAAGTCTTACTCTGAAGAAAGTTCGGTGACTTCAGCGGGGTCTTACACTACAAACCATAGGTACCACAATTGTACGTGTAGTGATGATGAAGATGGAGCAATGGAGTATTGGGATAGTGATGTTACTGATGAGGATGAGGATGAGGATGATGATGGTGGTGATAGTGACATGGGAGAAGAGTATGATGAAGTGGAAGAGGACTTTGAAGATGGAATAGTGTACTCAAGGTCAAGAAATGGTGATAATCAAGTGGTTGTTGGAGAGGTGGAAAGTCCAATTCTAATGCATGATAAGGATTTGAAGTCAATTGGGTTGAACCCAAATGTTCGAGATAGGAGTGTGTATGTTCTTTCTGTGATGAACCCTGTGGAGAACCTCACTCAATGGAAAGCAGTTAAGGCTAAAAGGGCACCCCCATTGGCGTCTCAGAAGGAGAATTTGGTTTTGAATCAAGAGTCTAGATCTGCATTTGCTGCAGAAACTCCTAAGAAGTTGAACCGAGAAATCGCGGTTGATGCTAGCCTTTCAAATTGGCTGGGTTCATCAGAAACTACACCTGTTAGCAAAGGTTTGTACGTGGGTACCCTGGAGAGGAGCAGCTCACAAGGCTCAAATTCAGTGGTGAGCCATGAAAATAGGCCTATTTTAGGTGCATTGACAGTTGAAGAGCTCAAACATTTTTCCGCTTCTTCTTCGCCAAGAAAATCACCAAAGGATGAGATGCCCATTATAGGCAGTGTTGGGGGCTATGCCGAGGATTCTGGCTCAGCAAATCGAGTAAGATCAAGAAGGGTACATTTGAAGTGA 1125 0.44 MGCFLHCFGSSKSTKPRRKAHHHHRLARDRLEQCSIQDYSETVVIGTASQEVQAKPLEQINVSPKKKVTFDVNVKTYEPDEVADFQLEKSEEGGEESALVEKLSRTKSYSEESSVTSAGSYTTNHRYHNCTCSDDEDGAMEYWDSDVTDEDEDEDDDGGDSDMGEEYDEVEEDFEDGIVYSRSRNGDNQVVVGEVESPILMHDKDLKSIGLNPNVRDRSVYVLSVMNPVENLTQWKAVKAKRAPPLASQKENLVLNQESRSAFAAETPKKLNREIAVDASLSNWLGSSETTPVSKGLYVGTLERSSSQGSNSVVSHENRPILGALTVEELKHFSASSSPRKSPKDEMPIIGSVGGYAEDSGSANRVRSRRVHLK* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1390 374 MobiDBLite consensus disorder prediction 109 128 - -
Gso19g1390 374 PANTHER RRNA BIOGENESIS PROTEIN RRP36 1 362 - -
Gso19g1390 374 MobiDBLite consensus disorder prediction 85 108 - -
Gso19g1390 374 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 1 362 IPR039300 GO:0007142
Gso19g1390 374 MobiDBLite consensus disorder prediction 85 128 - -
Gso19g1390 374 MobiDBLite consensus disorder prediction 332 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1390 Gso-Chr19 42735953 42737975 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1390 - - gmx:100808067 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1390 19 42735953 42737975 Gso3g1396 3 39921565 39923634 GST
Gso19g1390 19 42735953 42737975 Gso10g0339 10 3604323 3606290 PCT
Gso10g0339 10 3604323 3606290 Gso19g1390 19 42735953 42737975 PCT