Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0284 ATGTCTGGGGAAGTTTTTGATGGACAAGATGCAGGCTATGTGCCTGAGAACCCTGAGTTTCCGCAAAACCATTCTGACGAATACGATGGAGGAAATGTGATTGATGACTCAGGGTTTCCGCAACTGCAGCCTGATGAACACGATAATGGAGGGTTTCCGCAGCTGCAGCCTGATGAATATGATGCCGGAGGGTTTCCGCAGCTGCAGCCTGATGAACACGATGCCGGAGGGTTTCTGCAGCTGCAGCCTGATGAACACAATGCCGGCAATTTAGCTGAGGATGGCAATATTCCTGAACATAATTTTGACGGGAATGATGTTGAAGGGTTGCCTGGAAACCCTGATTTGCCTTCTCAAGAGCATGCTGAGGAACAAAATATTGGAGGAGATGTGACTGAGAATTTTGGCTCTGAGGAAAAGCGGGGACCTGAGGAGGATTTGAAAGGAGGTGAAGTAAAGAAGTGGCCAGGGTGGCCTGGAGAGAATGTTTTTAGGATGTTGGTTCCTGTGCAAAAGGTTGGCAGTATTATTGGCCGGAAAGGTGAGTTTATTAGGAAAATTACCGAAGACACTAAGGCTCGTATAAAAATTCTCGATGGTCCTCCTGGAACTTCAGAAAGAGCTGTAATGGTTTCTGCGAAAGAAGAGCCAGATTGCAGCATACCGCCTGCTGTGGATGGTTTGTTAAGGGTTCATAAACAAGTTGTCAATGTAGACCCTCATCCTGCCGATAGTGCATCAGGGGCAGTACGCCCAGTTGTTACAAGGCTTCTAGTGGCAGATACTCAAGCAGGAAGCTTGATTGGGAAGCAGGGCTCCACTATAAAATCCTTTCAAGATGCCACAGGTTGCAATATTCGCATTCTTGGTTCAGAACACCTGCCAGTTTTTGCTCTGCGAGATGATAGTATTGTTGAAATACAAGGGGAATCTTCTGGGGTTCACAAGGCGGTTGAACTTGTTGCAATTCATCTACGTAAATTCTTGGTTGATCGCAGCATAGTTGGAGTATTTGAAACACAAATGCAAAGGCCAGATGTTCGAGCAAACCAGAATGTGCCACCAGGCCCACCACACCAACCTTGGGGTCCTCCTCAAGGTTTTCCAGCTCCTGGGCCTGGTAGTGGTGGTGGACCTGCTTTTCCACCCAATACTCAGTATATGCCGCCTTCACATAATTATGATAATTACTACCCACCTGCTGACCTATCTCCTATGGACAAGCACCTTCATCAGGGTCCACCACCTGCCTATGTAAGAGATGTTTCTATGGGAATTCATTCATCCAGTGCACAGGCACAACAATCTGTTGTGACTAAGGTCACACAACACATGCAAATTCCTTTGTCCTATGCAGATGCTGTTATTGGAGCATCAGGGGCAAACATCAGCTACATCCGTCGAGCTAGTGGAGCAAGTATTACAATTCAGGAGACCAGGGGTGTGCCAGGAGAGATGACTGTTGAGATAAGTGGTACTGCTTCACAAATACAGGCTGCCCAACAGCTAGTGCAGAATTTCATGGCTGAAGCTGCAAGTGCGGCACAGGATCATATGGGGGGTTCAATTAACCAAGGTTACAATTCCTATCCTACAAATCCTGTCTATGCATCTCCGCCCTCAAGTGCTGCTGGTCATGCGGGCCATGCACCTTCTGCAGATTATGGTTCCGTTTACGGCACCAATTATGGCTATTGA 1698 0.4735 MSGEVFDGQDAGYVPENPEFPQNHSDEYDGGNVIDDSGFPQLQPDEHDNGGFPQLQPDEYDAGGFPQLQPDEHDAGGFLQLQPDEHNAGNLAEDGNIPEHNFDGNDVEGLPGNPDLPSQEHAEEQNIGGDVTENFGSEEKRGPEEDLKGGEVKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIRKITEDTKARIKILDGPPGTSERAVMVSAKEEPDCSIPPAVDGLLRVHKQVVNVDPHPADSASGAVRPVVTRLLVADTQAGSLIGKQGSTIKSFQDATGCNIRILGSEHLPVFALRDDSIVEIQGESSGVHKAVELVAIHLRKFLVDRSIVGVFETQMQRPDVRANQNVPPGPPHQPWGPPQGFPAPGPGSGGGPAFPPNTQYMPPSHNYDNYYPPADLSPMDKHLHQGPPPAYVRDVSMGIHSSSAQAQQSVVTKVTQHMQIPLSYADAVIGASGANISYIRRASGASITIQETRGVPGEMTVEISGTASQIQAAQQLVQNFMAEAASAAQDHMGGSINQGYNSYPTNPVYASPPSSAAGHAGHAPSADYGSVYGTNYGY* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0284 565 MobiDBLite consensus disorder prediction 346 414 - -
Gso10g0284 565 CDD PCBP_like_KH 254 322 - -
Gso10g0284 565 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 431 511 IPR036612 GO:0003723
Gso10g0284 565 CDD PCBP_like_KH 163 232 - -
Gso10g0284 565 SMART kh_6 439 509 IPR004087 GO:0003676
Gso10g0284 565 SMART kh_6 251 326 IPR004087 GO:0003676
Gso10g0284 565 SMART kh_6 160 233 IPR004087 GO:0003676
Gso10g0284 565 ProSiteProfiles Type-1 KH domain profile. 252 321 - -
Gso10g0284 565 PANTHER POLY(RC)-BINDING-LIKE PROTEIN 87 559 - -
Gso10g0284 565 ProSiteProfiles Type-1 KH domain profile. 161 228 - -
Gso10g0284 565 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 87 559 - -
Gso10g0284 565 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 245 334 IPR036612 GO:0003723
Gso10g0284 565 MobiDBLite consensus disorder prediction 134 152 - -
Gso10g0284 565 CDD KH-I 442 505 - -
Gso10g0284 565 Pfam KH domain 255 321 IPR004088 GO:0003723
Gso10g0284 565 Pfam KH domain 164 216 IPR004088 GO:0003723
Gso10g0284 565 Pfam KH domain 442 505 IPR004088 GO:0003723
Gso10g0284 565 Coils Coil 497 517 - -
Gso10g0284 565 Gene3D - 161 329 - -
Gso10g0284 565 MobiDBLite consensus disorder prediction 1 154 - -
Gso10g0284 565 Gene3D K Homology domain, type 1 427 516 IPR036612 GO:0003723
Gso10g0284 565 MobiDBLite consensus disorder prediction 351 386 - -
Gso10g0284 565 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 153 216 IPR036612 GO:0003723
Gso10g0284 565 ProSiteProfiles Type-1 KH domain profile. 440 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0284 Gso-Chr10 3021287 3027453 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0284 K21444 - gmx:100818363 1090.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1162 2 14537813 14543968 Gso10g0284 10 3021287 3027453 GST
Gso19g1348 19 42185323 42190143 Gso10g0284 10 3021287 3027453 PCT
Gso3g1347 3 39367922 39372711 Gso10g0284 10 3021287 3027453 PCT
Gso10g0284 10 3021287 3027453 Gso19g1348 19 42185323 42190143 PCT
Gso10g0284 10 3021287 3027453 Gso3g1347 3 39367922 39372711 PCT