Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01437 ATGGTCTGGTACCACACCAGAGCATATAACCATTCTTTCAAACAGAACAATACAAATCTCCATGCTTTTATAAATCAAACTCCAACCGATTTCTCTCTTCATTCAGTTCATTGCGTTCcctctcttctcttcctctcttctctATATAAAGTACTATTAACTCCCACTAAAACCCATTCCTGTCTTTTTCTTCTTCTTCCGGCTCTGCATTTGCAATACTCTGTTTTCTTGGTTTCAATTCAATCACACACCTCCATTGCCCTCATGGCTCACTTTACCTCCTCAGGTAAATCAGACGATCTCACAAAAGAAGACTGTAAGGGACAAAGTGCACTTGTTGTTTGCTTTGGTGAAATTTTAATAGATTTTGTGCCAACAGTGGGTGGAGTGTCACTAGCTGAAGCACCCGCTTTCAAGAAAGCTCCTGGTGGTGCTCCTGCCAACGTGGCTGTTGGAATATCTAGGCTTGGGGGGTCATCTGCCTTTGTAGGCAAGGTTGGAGCAGATGAATTTGGGTATATGTTGGCTGATATTTTAAAGCAGAACGATGTTGAGACATCTGGCATGAAGTTTGACCCTAATGCAAGAACTGCGTTAGCTTTTGTTACACTTAGAGCTGATGGTGAGCGTGAGTTCTTGTTTTTCCGAAATCCTAGTGCTGATATGCTACTTCAAGAGTCCGAGCTTGATAAAAATCTCATAAAGAAGGCTAAAATTTTCCATTATGGTTCCATCAGCTTGATTGATGAGCCATGCAAGTCTGCTCATCTTGCTGCTATGAGATTTGCTAAAGAATCTGGTTGCATTCTTTCGTATGATCCAAATTTGAGATTGGCACTATGGCCATCTGCTGAGGCTGCTCGGGATGGCATAATGAGTATATGGGATCAAGCCGATGTCATAAAGATAAGTGAGGATGAGATTACATTTTTGACTGGTGGTGATGATCCTTATGATGATAATGTTGTATTAAAGAAGCTTTTTCATCCCAATCTCAAGCTTTTAATAGTTACTGAAGGCTCAGAAGGTTGTAGATATTACACCAAGGAATTTAAGGGCAGGGTTGCTGGTGTTAAAGTTAAACCTGTTGACACAACTGGTGCTGGTGATGCATTTGTTAGTGGGATTATCTATAGCTTAGCTTCTGACCAAAGTCTTTTCCAGAATGAGGAGCATCTCCGAAAAGCTCTACATTTTGCCAATGTATGTGGTGCCATCACGGTAACAGAGAGAGGGGCAATTCCTGCATTACCTACAAAAGAAGCTGTTCTTCAATTCGCTGCAACATAA 1290 0.4039 MVWYHTRAYNHSFKQNNTNLHAFINQTPTDFSLHSVHCVPSLLFLSSLYKVLLTPTKTHSCLFLLLPALHLQYSVFLVSIQSHTSIALMAHFTSSGKSDDLTKEDCKGQSALVVCFGEILIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKVGADEFGYMLADILKQNDVETSGMKFDPNARTALAFVTLRADGEREFLFFRNPSADMLLQESELDKNLIKKAKIFHYGSISLIDEPCKSAHLAAMRFAKESGCILSYDPNLRLALWPSAEAARDGIMSIWDQADVIKISEDEITFLTGGDDPYDDNVVLKKLFHPNLKLLIVTEGSEGCRYYTKEFKGRVAGVKVKPVDTTGAGDAFVSGIIYSLASDQSLFQNEEHLRKALHFANVCGAITVTERGAIPALPTKEAVLQFAAT 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01437 429 PRINTS Ribokinase signature 138 157 IPR002139 GO:0016301
Gma20g01437 429 PRINTS Ribokinase signature 293 308 IPR002139 GO:0016301
Gma20g01437 429 PRINTS Ribokinase signature 335 346 IPR002139 GO:0016301
Gma20g01437 429 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 143 167 IPR002173 GO:0016773
Gma20g01437 429 Gene3D - 109 429 IPR029056 -
Gma20g01437 429 SUPERFAMILY Ribokinase-like 113 426 IPR029056 -
Gma20g01437 429 PANTHER HEXOKINASE FAMILY MEMBER 103 427 - -
Gma20g01437 429 CDD bac_FRK 112 414 - -
Gma20g01437 429 PANTHER FRUCTOKINASE-7-RELATED 103 427 - -
Gma20g01437 429 Pfam pfkB family carbohydrate kinase 111 419 IPR011611 -
Gma20g01437 429 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 364 377 IPR002173 GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01437 Gma-Chr20 41520215 41523906 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01437 K00847 - gmx:100818404 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02279 10 50374088 50377201 Gma20g01437 20 41520215 41523906 GST
Gma16g01639 16 37329535 37333377 Gma20g01437 20 41520215 41523906 PCT
Gma09g01427 09 38472257 38475455 Gma20g01437 20 41520215 41523906 PCT
Gma20g01437 20 41520215 41523906 Gma16g01639 16 37329535 37333377 PCT
Gma20g01437 20 41520215 41523906 Gma09g01427 09 38472257 38475455 PCT