Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01639 ATGGCTCATCCCACCTCATCAGGTCAATCCCATGATCTCAAAAAAGAAGATTGCAAGGAAACAAGATCACTGGTTGTTTGCTTTGGGGAAATGTTAATAGACTTTGTTCCAACGGTGGGAGGAGTGTCACTGGCTGAAGCACCCGCTTTCAAGAAAGCTCCTGGTGGTGCACCTGCCAATGTGGCTGTTGGTATCTCTAGACTGGGAGGTTCATCTGCTTTCATAGGCAAGGTTGGAGCAGATGAATTTGGGTACATGTTGGGTAACATTTTAAAGCAGAACAATGTTGAGACGTCTGGCATGCGGTTTGACTCTAATGCAAGAACTGCATTAGCTTTTGTTACACTTAGAGCGGATGGAGAACGTGAATTCTTGTTTTTCCGCAATCCAAGCGCTGATATGCTCCTTCAAGAGTCAGAACTTGATAAAGATATCCTAAAGCAGGCTAGAATATTCCATTATGGCTCCATCAGCTTGATTGATGAGCCATGCAAGTCAGCTCACCTTGCTGCTATGAGCATTGCCAAAAACTCTGGTTGCATTCTATCATATGATCCAAATTTGAGATTGGCTCTATGGCCTTCTGCAGACTCCGCTCGGAAAGGCATAATGGATATATGGGATCAAGCTGATGTTATAAAGATAAGTGAGGATGAGATTACATTTTTGACTGGGGGTGATGATCCTTATGATGATAATGTTGTTTTGAAGAAACTTTTTCACCCAAATCTCAAGCTTTTAATTGTTACTGAAGGTTCACAGGGTTGCAGATATTACACGAAGGCATTTAAGGGCAGGGTTGCAGGTGTTAAAGTTAAACCTGTAGACACAACTGGAGCTGGCGATGCATTTGTTAGTGGGATTTTATACTGCATAGCTTCTGACCAAACTATTTTTCAGGATGAGAAACGTCTTCGAAAGGCTTTATATTTTGCCAATGTATGTGGTGCCCTCACTGTAACTGAGAGAGGTGCAATTCCTGCACTACCTACAAAGGAAGCTATCTTGCAATTCTTACTAGAAGCAGCTGTAATATAA 1038 0.422 MAHPTSSGQSHDLKKEDCKETRSLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFIGKVGADEFGYMLGNILKQNNVETSGMRFDSNARTALAFVTLRADGEREFLFFRNPSADMLLQESELDKDILKQARIFHYGSISLIDEPCKSAHLAAMSIAKNSGCILSYDPNLRLALWPSADSARKGIMDIWDQADVIKISEDEITFLTGGDDPYDDNVVLKKLFHPNLKLLIVTEGSQGCRYYTKAFKGRVAGVKVKPVDTTGAGDAFVSGILYCIASDQTIFQDEKRLRKALYFANVCGALTVTERGAIPALPTKEAILQFLLEAAVI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01639 345 Gene3D - 20 344 IPR029056 -
Gma16g01639 345 SUPERFAMILY Ribokinase-like 25 339 IPR029056 -
Gma16g01639 345 CDD bac_FRK 24 326 - -
Gma16g01639 345 PANTHER FRUCTOKINASE-7-RELATED 16 341 - -
Gma16g01639 345 PANTHER HEXOKINASE FAMILY MEMBER 16 341 - -
Gma16g01639 345 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 276 289 IPR002173 GO:0016773
Gma16g01639 345 Pfam pfkB family carbohydrate kinase 24 331 IPR011611 -
Gma16g01639 345 PRINTS Ribokinase signature 50 69 IPR002139 GO:0016301
Gma16g01639 345 PRINTS Ribokinase signature 205 220 IPR002139 GO:0016301
Gma16g01639 345 PRINTS Ribokinase signature 247 258 IPR002139 GO:0016301
Gma16g01639 345 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01639 Gma-Chr16 37329535 37333377 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01639 K00847 - gmx:100778752 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01639 16 37329535 37333377 Gma09g01427 09 38472257 38475455 GST
Gma16g01639 16 37329535 37333377 Gma10g02279 10 50374088 50377201 PCT
Gma16g01639 16 37329535 37333377 Gma20g01437 20 41520215 41523906 PCT
Gma10g02279 10 50374088 50377201 Gma16g01639 16 37329535 37333377 PCT
Gma20g01437 20 41520215 41523906 Gma16g01639 16 37329535 37333377 PCT