Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01427 atgaccttaactttgcggctgaaaagcacggtcacagaccgctttttaaaaccttggGGTCAATCCAATGATCTCACAAAAGAAGATTGCAAGGAAACAAGTTCAGTGGTTGTTTGCTTCGGGGAAATGTTAATAGACTTTGTTCCAATGGTGGGAGGAGTGTCACTGGCTGAAGCACCCGCTTTCAAGAAAGCTCCTGGTGGTGCTCCTGCCAATGTGGCTGTTGGTATCTCTAGACtaggaagttcatctgctttcataggcaagGTTGGAGCAGATGAATTTGGGTACATGTTGGCTGACATTTTAAAGCAGAACAATGTTGAGACTTCTGGCATGCGGTTTGACTCTAATGCAAGAACTGCATTAGCTTTTGTTACACTTAGAGCGGATGGCGAACGTGAGTTCTTGTTTTTCCGCAATCCAAGCGCTGATATGCTCCTTCAAGAGTCAGAACTTGATAAAGATCTCCTAAAGAAGGCTAGAATATTCCATTATGGCTCCATCAGCTTGATTGATGAGCCATGCAAGTCAGCTCACCTTGCTGCTATGAGCATTGCCAAAAACTCTGGTTGCATTCTATCATATGATCCAAATTTGAGATTGGCTCTATGGCCTTCTGCAGACGCCGCTCGGAAAGGCATAATGGATATATGGGATCAAGCTGATGTCATAAAGATAAGTGAGGATGAGATTACATTTTTGACTGGTGGTGATGATCCCTATGATGATAATGTAGTTTTGAAGAAACTTTTTCACCCAAATCTCAAGCTTTTAATCGTTACTGAAGGTTCACAGGGTTGCAGATATTACACCAAGGCATTTAAAGGCAGGGTTTCAGGTGTTAAAGTTAAACCTGTAGACACAACTGGAGCTGGCGATGCATTTGTTAGTGGGATTTTACACTGCATAGCTTCTGACCAAACTATTTTTCAGGATGAGAAACGTCTTCGAAAGGCTTTATATTTTGCCAATGTATGTGGTGCCCTCACTGTAACTCAGAGAGGTGCAATTCCTGCACTACCTACAAAGGAAGCTATCTTGCAATTCTTACTAGAAGCAGCTGTAATTTAA 1074 0.3883 MTLTLRLKSTVTDRFLKPWGQSNDLTKEDCKETSSVVVCFGEMLIDFVPMVGGVSLAEAPAFKKAPGGAPANVAVGISRLGSSSAFIGKVGADEFGYMLADILKQNNVETSGMRFDSNARTALAFVTLRADGEREFLFFRNPSADMLLQESELDKDLLKKARIFHYGSISLIDEPCKSAHLAAMSIAKNSGCILSYDPNLRLALWPSADAARKGIMDIWDQADVIKISEDEITFLTGGDDPYDDNVVLKKLFHPNLKLLIVTEGSQGCRYYTKAFKGRVSGVKVKPVDTTGAGDAFVSGILHCIASDQTIFQDEKRLRKALYFANVCGALTVTQRGAIPALPTKEAILQFLLEAAVI 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01427 357 PANTHER FRUCTOKINASE-7-RELATED 27 353 - -
Gma09g01427 357 PANTHER HEXOKINASE FAMILY MEMBER 27 353 - -
Gma09g01427 357 SUPERFAMILY Ribokinase-like 37 351 IPR029056 -
Gma09g01427 357 Coils Coil 356 357 - -
Gma09g01427 357 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 288 301 IPR002173 GO:0016773
Gma09g01427 357 CDD bac_FRK 37 338 - -
Gma09g01427 357 Pfam pfkB family carbohydrate kinase 37 343 IPR011611 -
Gma09g01427 357 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 67 91 IPR002173 GO:0016773
Gma09g01427 357 PRINTS Ribokinase signature 62 81 IPR002139 GO:0016301
Gma09g01427 357 PRINTS Ribokinase signature 217 232 IPR002139 GO:0016301
Gma09g01427 357 PRINTS Ribokinase signature 259 270 IPR002139 GO:0016301
Gma09g01427 357 Gene3D - 33 356 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01427 Gma-Chr9 38472257 38475455 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01427 K00847 - gmx:100792618 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01639 16 37329535 37333377 Gma09g01427 09 38472257 38475455 GST
Gma09g01427 09 38472257 38475455 Gma10g02279 10 50374088 50377201 PCT
Gma09g01427 09 38472257 38475455 Gma20g01437 20 41520215 41523906 PCT
Gma10g02279 10 50374088 50377201 Gma09g01427 09 38472257 38475455 PCT
Gma20g01437 20 41520215 41523906 Gma09g01427 09 38472257 38475455 PCT