Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02279 ATGGCCCACTTTACCTCCTCAGGTAAATCAGACAATCTCACCAAAGAAGACTGTATTGGAAAAAGTGCGCTGGTTGTTTGCTTTGGTGAAATTTTAATAGACTTTGTGCCAACAGTGTGTGGAGTGTCACTAGCTGAAGCACCTGCTTTCAAGAAAGCTCCTGGTGGTGCTCCTGCCAATGTGGCTGTTGGAATCTCTAGGCTTGGGGGTTCATCTGCCTTTGTAGGCAAGGTTGGAGCAGATGAATTTGGGTATATGTTGGTTGATATTTTAAAGAAGAACAATGTTGAGACATCTGGCATGAAGTTTGACCCTAATGCAAGAACTGCGTTAGCTTTTGTTACACTTAGAGCTGATGGTGAGCGCGAGTTCTTGTTTTTCCGAAATCCTAGTGCTGATATGCTACTTCAAGAGTCAGAACTTGATGAAAATCTCATAAAGAAGGCTAAAATTTTCCATTATGGTTCCATCAGCTTGATTGATGAGCCATGCAAGTCTGCTCATCTTGCTGCTATGAGATTTGCTAAAGAATCTGGTTGCATTCTTTCATATGATCCAAATTTGAGATTGGCACTATGGCCATCAGCTGAGGCTGCTAGGGATGGCATAATGAGTATATGGGATCAAGCTGATATCATAAAGATAAGTGAGGAAGAGATTACATTTTTGACTGGTGGTGATGATCCTTATGATGATAATGTTGTATTAAATAAGCTTTTTCACCCTAATCTCAAGCTTTTAATAGTTACTGAAGGGTCAGAAGGTTGTAGATATTACACCAAGGAATTTAAGGGCAGGGTTGCTGGTGTTGAAGTTAAACCCGTAGACACAACTGGTGCTGGTGATGCATTTGTTAGTGGGATTATCTATAGCTTAGCTTCCGATCAAAGCCTTTTCCAGAATGAGGAGCATCTCCGAAAAGCTCTATATTTTGCCAATGTATGCGGTGCGATCACGGTAACAGAAAGAGGGGCAATTCCTGCATTACCTACAAAAGAAGCTGTTCTTCAATTCGCTGCAACATAA 1026 0.4123 MAHFTSSGKSDNLTKEDCIGKSALVVCFGEILIDFVPTVCGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKVGADEFGYMLVDILKKNNVETSGMKFDPNARTALAFVTLRADGEREFLFFRNPSADMLLQESELDENLIKKAKIFHYGSISLIDEPCKSAHLAAMRFAKESGCILSYDPNLRLALWPSAEAARDGIMSIWDQADIIKISEEEITFLTGGDDPYDDNVVLNKLFHPNLKLLIVTEGSEGCRYYTKEFKGRVAGVEVKPVDTTGAGDAFVSGIIYSLASDQSLFQNEEHLRKALYFANVCGAITVTERGAIPALPTKEAVLQFAAT 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02279 341 CDD bac_FRK 24 326 - -
Gma10g02279 341 PANTHER CARBOHYDRATE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 14 338 - -
Gma10g02279 341 PANTHER HEXOKINASE FAMILY MEMBER 14 338 - -
Gma10g02279 341 Gene3D - 21 341 IPR029056 -
Gma10g02279 341 PRINTS Ribokinase signature 50 69 IPR002139 GO:0016301
Gma10g02279 341 PRINTS Ribokinase signature 205 220 IPR002139 GO:0016301
Gma10g02279 341 PRINTS Ribokinase signature 247 258 IPR002139 GO:0016301
Gma10g02279 341 SUPERFAMILY Ribokinase-like 25 338 IPR029056 -
Gma10g02279 341 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 276 289 IPR002173 GO:0016773
Gma10g02279 341 Pfam pfkB family carbohydrate kinase 23 331 IPR011611 -
Gma10g02279 341 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02279 Gma-Chr10 50374088 50377201 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02279 K00847 - gmx:100816740 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02279 10 50374088 50377201 Gma10g02279 10 50374088 50377201 ECH
Gma10g02279 10 50374088 50377201 Gma20g01437 20 41520215 41523906 GST
Gma16g01639 16 37329535 37333377 Gma10g02279 10 50374088 50377201 PCT
Gma09g01427 09 38472257 38475455 Gma10g02279 10 50374088 50377201 PCT
Gma10g02279 10 50374088 50377201 Gma16g01639 16 37329535 37333377 PCT
Gma10g02279 10 50374088 50377201 Gma09g01427 09 38472257 38475455 PCT