Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00919 ATGGAAAACTCAGCTCTAGGCTTATATGAATATTGTGCACAATTAGATGCCACTGGCAGAAGAGTTGATTTGAATCAACGACCTGAGGTTACAAAGGGTACTGTAGAATATGTTGCCCCAACAGATTATATGGTGCGGCCTCCTATGCTTCCAGTATATTTCTTCCTCATTGATGTTTCCATAACTGCAGTTAGAAGTGTAATGGTTGAGGTTGTGGCCCAAACAATCAACTCATGCTTAGATGAGCTGCCTGGCATTCCACGAACACAAATTGGGTTTGCAACTTTTGACAGCACAATACATTTTTATAACATGAAGATGTTGGTGGTCTCAGATCTGGATGACATATTTGTTCCCCTGCCAGATTATCTCCTTGTGAACTTATCAGAATCAAGAAGTGTGGTGGAAACCTTTCTTGATAGTCTGCCATCCATGTTCCAGGACAAAGTGAATCTGGAATCTGCTTTCGGTCCTGCTCTCAAGGCTGCCTTTATGATTATGGTTACTCTTAAAGATAATGATAATGAAATGTCAAGGAGGCTGAAGAAGGTACTTGAGAAATTCAGAAGTACTGACTGTGCATATTACCAATTGTGCCACCTTGTGAGGCAAGGCGAACACCCCAAAGAAGGATTCTTTCTTCTTTCAAACTTGTTTGAGGACCAGATGGGTGCTAATATTGGGTATGCTGATTGGATGCTACAGATTTCCCGACAAGTGCAGCAAGCATAA 732 0.4153 MENSALGLYEYCAQLDATGRRVDLNQRPEVTKGTVEYVAPTDYMVRPPMLPVYFFLIDVSITAVRSVMVEVVAQTINSCLDELPGIPRTQIGFATFDSTIHFYNMKMLVVSDLDDIFVPLPDYLLVNLSESRSVVETFLDSLPSMFQDKVNLESAFGPALKAAFMIMVTLKDNDNEMSRRLKKVLEKFRSTDCAYYQLCHLVRQGEHPKEGFFLLSNLFEDQMGANIGYADWMLQISRQVQQA 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00919 243 SUPERFAMILY vWA-like 48 167 IPR036465 -
Gma20g00919 243 Pfam Sec23/Sec24 trunk domain 48 169 IPR006896 GO:0006886|GO:0006888|GO:0030127
Gma20g00919 243 PANTHER SEC24-RELATED PROTEIN 168 242 - -
Gma20g00919 243 PANTHER OS04G0129500 PROTEIN 168 242 - -
Gma20g00919 243 PANTHER OS04G0129500 PROTEIN 10 168 - -
Gma20g00919 243 PANTHER SEC24-RELATED PROTEIN 10 168 - -
Gma20g00919 243 Gene3D von Willebrand factor, type A domain 51 184 IPR036465 -
Gma20g00919 243 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 173 242 IPR036180 -
Gma20g00919 243 SUPERFAMILY Zn-finger domain of Sec23/24 10 47 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00919 Gma-Chr20 35718810 35724780 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00919 K14007 - gmx:102665806 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01427 10 41329525 41336494 Gma20g00919 20 35718810 35724780 GST
Gma19g02145 19 50334626 50343177 Gma20g00919 20 35718810 35724780 PCT
Gma03g02111 03 46652730 46660731 Gma20g00919 20 35718810 35724780 PCT
Gma20g00919 20 35718810 35724780 Gma19g02145 19 50334626 50343177 PCT
Gma20g00919 20 35718810 35724780 Gma03g02111 03 46652730 46660731 PCT