Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02111 ATGGGGACTGAAAATCCTGGTCGTCCAACCTTCCCTCCTTCAAGACCTGCTTCATCGCCTTTTGCCGCTGCACAGACAGTGTCACCTTTTTCGTCAACCGGTCCCGTGGCTGGATCAGAGCCTCCTTCTTTTCGCCCTAGTCCTTCTGCTCCTCCACCGCAAGGCGCCATGCGGTTTTCGTCGGCTGGACCTGCTGCAGTTAGACCCGGAGCACCCAGTTTTAGACCTGCACCACCAGGGAGGTTCAATGATCCATCAGTACCTCCTCCAGTGGGACCTTCCAATGCCCCACCGGCTGCTGGACCTTTCCAGCAGTTTCCGCCACCGCCCTTTTCCCCAACAATGCAGCCACGTGGTCCTCCGCCGCCAATGTTACCGCCATCAATTCAATCTCCACCTAGTCAAGCACTGCCTTTTCCCACGTCTCTTCCGGCTCAACCACAGATGCCTTCTGTTCCAATGGGCTCTCCCCCGCCGCCGCCACAAAGTGCTGCTCCTGCACATTTAGGTTCAAATTTTCCTCCTCCGCCACCTACAATTCAGCCATCTTTTCCTGGGTACCCGAGTAAGCATGCCGGTCCTGAAATGCAAGCTCCACCTATGCACTCCTCGTTCCCTGCTAATCAAGGAAATTTTGGGCCTGTCCCGCCTGCGGCTTCTTCTCCTTTTTTGTCTCACCCAGGAGGTTATGTTCCATCACCCCCAATGGCTCCCCCACTAGGTATCCAGCCAATGCAGCAGCCAGGATCTGTGCCCCCAATGGGTGCCATTCAGGGCTTGGCAGAAGACTTCAACGCACTCACATTGCAAACTCGTCCTGGAACAATGGATCCATTATTTGATGCCAAGGAACTTCCAAGGCCATTGGAAGGTGATGTTGAACCAAAGAATTTGGTTGACATGTATCCCATGAACTGCAGTCCCCGGTATCTACGACTCACAACCAGTGCAGTTCCTAGCTCCCAGTCCTTGGCTTCAAGGTGGCATCTTCCTCTTGGAGCAGTTGTATGTCCGCTTGCTGAACCTCCTGATGGGGAAGAGGTGCCTATAGTTAATTTTGCTCCAGCTAGTGTTGTCCGCTGCAGAAGATGTCGCACATATGTGAATCCTTATATGACATTTACGGAAGCTGGAAGAAAGTTCCGTTGCAACATCTGTACCTTGCTTAACGATGTTCCTAGTGAATATTATGCTCAATTAGATGCAACTGGAAAAAGAGTTGATATAAATCAACGACCTGAGCTTACAAAGGGGACTGTAGAATTTGTTGCCCCTGCTGAGTACATGGTGCGGCCTCCTATGCCACCAGTGTATTTCTTCCTCATTGATGTTTCCATATCTGCTGTTAGAAGTGGCATGATTGAGGTTGTAGCCAATACAATAGAGTCATGCTTAGATGAGCTGCCCGGCTTTCCACGTACGCAAATAGGGTTTGCAACTTTTGACAGCACAATACATTTTTATAACATGAAGTCTTCCTTGACTCAACCACAGATGTTGGTAGTGTCAGATCTCGATGATATATTTATTCCACTGCCAGATGATCTTCTCGTTAACTTGTCTGAATCAAGAAATGTGGTAGAAACCTTCCTAGATAGTTTGCCAACCATGTTCCAGGACAATGTAAACTTGGAATCAGCTTTTGGTCCTGCTCTTAAGGCTGCATTTATGGTTATGAGTCAACTTGGAGGGAAATTGTTAATATTTCAAAACACACTTCCATCTCTTGGTGTTGGCCGCTTGAAGTTACGTGGAGATGATTCTCGTGTTTACGGGACAGACAAAGAATATGGATTGAGACTGCCTGATGATCCATTCTATAAACAAATGGCTGCTGAGTTTTCCAAGTACCAAATCTCAACAAATGTGTATGCATTCAGTGATAAGTACACTGACATAGCCTCCTTAGGAACTCTGGCAAAGTATACTGCTGGTCAAGTGTATTACTACCCAGCTTTCCAATCAGCCATTCATGGGGAGAAATTGAGACATGAATTGAGGAGAGACCTTACCAGAGAAACTGCATGGGAAGCTGTAATGCGCATTAGATGTGCAAAAGGTGTTCGCTTCACAACTTATCATGGAAACTTCATGCTGAGGTCCACTGATTTGTTAGCACTTCCTGCTGTAGATTGTGATAAAGCCTTTGCCATGCAGTTATCACTTGAAGAGACATTGTTGACAACTCAGACAATGTATTTGCAAGTAGCATTGTTATATACTGCATCTTGTGGTGAAAGGCGAATAAGAGTACACACAATGGCAGTTCCAGTAGTTACAGAGTTAGCAGATATCTATCGGCTGGCTGATACGGGTGCAATTGTATCACTGTTAAGTAGGCTAGCAATTGAGAAAACATTGTCCCAAAAACTGGAAGATGCACGGAGTGCTGTTCAACTAAGAGTTGTGAAAGCCCTCAGGGAATATCGAAATCTTTATTCTGTGCAACATCGCTTGGCAAACAGAATGATATATCCTGAGTCTTTAAAGTTCTTAATGTTGTATGGATTAGCCCTTTGTAGATCAACAGCTTTACGTGGAGGGTATGGCGATGTTCCACTGGATGAACGGTGTGCTGCAGGACACATAATGATGACTGTATCAATAAAAAGACTGTTGAAACTTCTCTATCCTAGCTTAATTCGACTTGATGAATATCTTCTGAAGGCATCTGTACAGGCTGATGACTTAAAAAGTGTTGAGAGAAGGTTACCTTTGACTGGGGAGAGCTTAGACTCTAGAGGCCTTTATATTTATGATGATGGTTTCCGGTTCATTATATGGTTTGGTCGGGTGATTTCACCTGATATAGCCAAGAATTTACTTGGGGCAGACTTTGCAGCAGAACTATCAAAGACTACTCTCAGTGAGCATGATAATGAAATGTCAAGGAGGCTGGTGAAGGTACTTGAGAAGTTGAGATATACAGATCGTGCATATTACCAGTTGTGCCACCTTGTGAGGCAAGATATCCCGACAAGTGCAGCAATCATAATATATAGCTTCCCTGGCTAA 3015 0.4587 MGTENPGRPTFPPSRPASSPFAAAQTVSPFSSTGPVAGSEPPSFRPSPSAPPPQGAMRFSSAGPAAVRPGAPSFRPAPPGRFNDPSVPPPVGPSNAPPAAGPFQQFPPPPFSPTMQPRGPPPPMLPPSIQSPPSQALPFPTSLPAQPQMPSVPMGSPPPPPQSAAPAHLGSNFPPPPPTIQPSFPGYPSKHAGPEMQAPPMHSSFPANQGNFGPVPPAASSPFLSHPGGYVPSPPMAPPLGIQPMQQPGSVPPMGAIQGLAEDFNALTLQTRPGTMDPLFDAKELPRPLEGDVEPKNLVDMYPMNCSPRYLRLTTSAVPSSQSLASRWHLPLGAVVCPLAEPPDGEEVPIVNFAPASVVRCRRCRTYVNPYMTFTEAGRKFRCNICTLLNDVPSEYYAQLDATGKRVDINQRPELTKGTVEFVAPAEYMVRPPMPPVYFFLIDVSISAVRSGMIEVVANTIESCLDELPGFPRTQIGFATFDSTIHFYNMKSSLTQPQMLVVSDLDDIFIPLPDDLLVNLSESRNVVETFLDSLPTMFQDNVNLESAFGPALKAAFMVMSQLGGKLLIFQNTLPSLGVGRLKLRGDDSRVYGTDKEYGLRLPDDPFYKQMAAEFSKYQISTNVYAFSDKYTDIASLGTLAKYTAGQVYYYPAFQSAIHGEKLRHELRRDLTRETAWEAVMRIRCAKGVRFTTYHGNFMLRSTDLLALPAVDCDKAFAMQLSLEETLLTTQTMYLQVALLYTASCGERRIRVHTMAVPVVTELADIYRLADTGAIVSLLSRLAIEKTLSQKLEDARSAVQLRVVKALREYRNLYSVQHRLANRMIYPESLKFLMLYGLALCRSTALRGGYGDVPLDERCAAGHIMMTVSIKRLLKLLYPSLIRLDEYLLKASVQADDLKSVERRLPLTGESLDSRGLYIYDDGFRFIIWFGRVISPDIAKNLLGADFAAELSKTTLSEHDNEMSRRLVKVLEKLRYTDRAYYQLCHLVRQDIPTSAAIIIYSFPG 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02111 1004 Pfam Gelsolin repeat 905 957 IPR007123 -
Gma03g02111 1004 Pfam Sec23/Sec24 trunk domain 433 669 IPR006896 GO:0006886|GO:0006888|GO:0030127
Gma03g02111 1004 MobiDBLite consensus disorder prediction 228 246 - -
Gma03g02111 1004 Gene3D - 306 758 - -
Gma03g02111 1004 Gene3D Sec23/Sec24 helical domain 759 877 - -
Gma03g02111 1004 Gene3D Severin 878 995 IPR029006 -
Gma03g02111 1004 MobiDBLite consensus disorder prediction 1 247 - -
Gma03g02111 1004 Pfam Sec23/Sec24 helical domain 770 873 IPR006900 GO:0006886|GO:0006888|GO:0030127
Gma03g02111 1004 PANTHER OS04G0129500 PROTEIN 29 991 - -
Gma03g02111 1004 PANTHER SEC24-RELATED PROTEIN 29 991 - -
Gma03g02111 1004 SUPERFAMILY beta-sandwich domain of Sec23/24 196 768 - -
Gma03g02111 1004 MobiDBLite consensus disorder prediction 19 38 - -
Gma03g02111 1004 SUPERFAMILY Helical domain of Sec23/24 770 877 IPR036175 GO:0006886|GO:0006888|GO:0030127
Gma03g02111 1004 CDD Sec24-like 433 674 IPR041742 GO:0006886|GO:0006888|GO:0030127
Gma03g02111 1004 Pfam Sec23/Sec24 zinc finger 359 396 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Gma03g02111 1004 Gene3D - 304 417 - -
Gma03g02111 1004 SUPERFAMILY vWA-like 433 672 IPR036465 -
Gma03g02111 1004 MobiDBLite consensus disorder prediction 71 184 - -
Gma03g02111 1004 Gene3D von Willebrand factor, type A domain 435 672 IPR036465 -
Gma03g02111 1004 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 887 990 IPR036180 -
Gma03g02111 1004 SUPERFAMILY Zn-finger domain of Sec23/24 349 432 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Gma03g02111 1004 Pfam Sec23/Sec24 beta-sandwich domain 675 759 IPR012990 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02111 Gma-Chr3 46652730 46660731 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02111 K14007 - gmx:100810009 1815.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02145 19 50334626 50343177 Gma03g02111 03 46652730 46660731 GST
Gma03g02111 03 46652730 46660731 Gma10g01427 10 41329525 41336494 PCT
Gma03g02111 03 46652730 46660731 Gma20g00919 20 35718810 35724780 PCT
Gma10g01427 10 41329525 41336494 Gma03g02111 03 46652730 46660731 PCT
Gma20g00919 20 35718810 35724780 Gma03g02111 03 46652730 46660731 PCT