Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02145 ATGGGGACCGAAAATCCTGGTCGTCCAACCTTCCCTCCTTCAAGACCTGCTTCATCGCCTTTTGCCGCTGCACAGACAGTATCACCTTTTTCGTCAAGCGGTCCCGTTGCTGGATCAGAGCCTCCTTCTTTTCGGCCTAGTCCTCCAGCTCCTCCGCCGCAAGCCGCCACGCCGTTTTCGTCGGCTGGACCTGCTGCAGTTAGACCTGGGGCACCCAGTTTTAGACCTGCACCACCAGGGAGGTTCAATGATCCATCGGTACCGCTTCCCGTGCGACCATCAAATGCCTCACCGGCTGCTGGGCCTTTTCAGCAGTTTCCGCCGGCACCGTCCTTTCCCCCAACAATGCAACCACGTGGTCCTCCGCTGCCAATGGGACCACCATCAATTCAATCTCCACCTAGTCAAGCACAGCCTTTTCCCACGTCTCTTCCAGCTCAGCCACAGATGCCTTCTGTTCCAATGGGCTCTCCCCCGCCACAAAGTGCTGCTCCTGCACATTTAGGTTCAAATTTTCCTCCGCCACCTACAATTCAGCCATCTTTTCCTGGGTACCCGAGTAAGCAGGCTGGTCCTGAAATGCAAGCTCCACCTATGCATTCCTCATTCCCTGCTAATCAAGGAAATTTTGGGCCTGTCCCACCTGCAGCGGCTTCTCCTTTTTTGTCTCATCCAGGAGGCTATGTTCCACCGCCTCCAATGGCTCCCCCGCTAGGTATCCAGCCAATGCAGCAGCCAGGATCTGTGCCCCCAATGGGTGCTGTTCAGGGCTTGGCAGAAGACTTCAACGCACTCACATTGCAAACTCGTCCTGGAACAATGGATCCGTTATTTGATGCCAAGGAACTTCCACGGCCATTAGAAGGTGATATTGAACCAAAGAATTTGGTTGACATGTATCCCATGAACTGCAATCCCCGGTATCTACGACTCACAACCAGTGCAGTTCCTAGCTCTCAGTCCTTGGCTTCAAGGTGGCATCTTCCTCTTGGAGCAGTTGTATGTCCGCTTGCTGAGCCTCCTGATGGGGAAGAGGTGCCTATAGTTAATTTTGCTCCAGCTAGTGTTGTCCGCTGCAGAAGATGTCGCACATATGTGAATCCTTATATGACATTTACGGAAGCTGGAAGAAAGTTTCGTTGCAACGTCTGTACCTTGCTTAATGATGTGCCTAGTGAGTATTATGCACAATTAGATGCAACTGGAAAAAGAGTTGACATAAATCAACGACCTGAACTTACAAAGGGGACTGTAGAATTTGTTGCCCCTGCTGAGTACATGGTGCGGCCTCCTATGCCACCAGTGTATTTCTTCCTCATCGATGTTTCCATATCTGCTGTTAGAAGTGGCATGATTGAGGTTGTGGCCAATACAATTAAGTCATGCTTAGATGAGCTGCCCGGCTTTCCACGTACGCAAATAGGGTTTGCAACTTTTGACAGCACAATACATTTTTATAACATGAAGTCTTCCTTGACTCAACCACAGATGTTGGTAGTGTCAGATCTTGATGATATATTTATTCCACTGCCAGATGATCTTCTTGTTAACTTGTCTGAATCAAGAAGTGTGGTAGAAACCTTCCTAGATAGTTTGCCAACCATGTTTCAGGACAATGTTAACTTGGAATCAGCTTTTGGTCCTGCTCTCAAGGCTGCGTTTATGGTTATGAGTCAACTTGGAGGAAAATTGTTAATATTTCAAAACACACTCCCATCTCTTGGTGTTGGCCGCTTGAAGTTACGTGGAGATGATTCTCGTGTTTACGGGACAGACAAAGAGCATGGACTGAGACTGCCTGAAGATCCATTCTATAAACAAATGGCTGCTGAGTTTTCCAAGTACCAAATCTCAACAAATGTGTATGCATTCAGTGATAAGTACACTGACATAGCCTCCTTAGGAACTCTGGCAAAGTATACTGCTGGTCAAGTGTATTACTATCCAGCTTTCCAATCAGCCATTCACGGGGAGAAATTGAGACATGAATTGAGGAGAGACCTTACCAGAGAAACTGCATGGGAAGCTGTAATGCGCATTAGATGTGCAAAAGGTGTTCGCTTCACAACTTATCATGGAAACTTCATGCTGAGGTCCACCGATTTGTTAGCACTTCCTGCTGTAGATTGTGATAAAGCCTTTGCCATGCAGTTATCACTTGAAGAGACATTGTTGACAACTCAGACAATGTATTTACAAGTAGCATTGCTATATACTGCATCTTGTGGTGAAAGGCGAATAAGAGTACACACAATGGCAGTTCCAGTAGTTACAGAGTTAGCAGATATATATCGGCTGGCTGATACTGGTGCAATTGTATCACTGTTAAGTAGGCTAGCAATTGAGAAAACATTGTCCCAAAAACTGGAAGATGCACGGAGTGCTGTTCAACTAAGAGTTGTAAAAGCCCTCAGGGAATATCGAAATCTTTATGCTGTGCAACATCGCTTGGCAAACAGAATGATATATCCTGAGTCTTTAAAGTTCTTAATGTTGTATGGATTAGCCCTTTGTAGATCAACAGCTTTACGTGGAGGGTATGGTGATGTTCCACTGGATGAACGATGTGCAGCAGGACACATAATGATGACTGTATCAATAAGAAGACTGTTGAAACTTCTCTATCCTAGCTTGATTCGACTTGATGAATATCTTCTGAAGGCATCTGTACAGGCTAATGACTTAAAAAGTGTTGAGAGAAGGTTACCTTTGACTGGGGAGAGCTTAGACTCTAGAGGTCTTTATATTTATGATGATGGCATCCGGTTCATTATATGGTTTGGTAGGGTGATTTCACCTGATATAGCAAAGAATTTACTTGGGGCAGACTTTGCTGCAGAATTATCAAAGACTACTCTCAGTGAGCATGATAATGAAATGTCAAGGAGGCTGGTGAAGGTACTTGAGAAGTTGAGAAATACAGATCGTGCATATTACCAGTTGTGCCACCTTGTGAGGCAAGATATCTCGACAAGTGCAGCAATCATAATATATAGCTTCCCTGGCTAA 3009 0.4576 MGTENPGRPTFPPSRPASSPFAAAQTVSPFSSSGPVAGSEPPSFRPSPPAPPPQAATPFSSAGPAAVRPGAPSFRPAPPGRFNDPSVPLPVRPSNASPAAGPFQQFPPAPSFPPTMQPRGPPLPMGPPSIQSPPSQAQPFPTSLPAQPQMPSVPMGSPPPQSAAPAHLGSNFPPPPTIQPSFPGYPSKQAGPEMQAPPMHSSFPANQGNFGPVPPAAASPFLSHPGGYVPPPPMAPPLGIQPMQQPGSVPPMGAVQGLAEDFNALTLQTRPGTMDPLFDAKELPRPLEGDIEPKNLVDMYPMNCNPRYLRLTTSAVPSSQSLASRWHLPLGAVVCPLAEPPDGEEVPIVNFAPASVVRCRRCRTYVNPYMTFTEAGRKFRCNVCTLLNDVPSEYYAQLDATGKRVDINQRPELTKGTVEFVAPAEYMVRPPMPPVYFFLIDVSISAVRSGMIEVVANTIKSCLDELPGFPRTQIGFATFDSTIHFYNMKSSLTQPQMLVVSDLDDIFIPLPDDLLVNLSESRSVVETFLDSLPTMFQDNVNLESAFGPALKAAFMVMSQLGGKLLIFQNTLPSLGVGRLKLRGDDSRVYGTDKEHGLRLPEDPFYKQMAAEFSKYQISTNVYAFSDKYTDIASLGTLAKYTAGQVYYYPAFQSAIHGEKLRHELRRDLTRETAWEAVMRIRCAKGVRFTTYHGNFMLRSTDLLALPAVDCDKAFAMQLSLEETLLTTQTMYLQVALLYTASCGERRIRVHTMAVPVVTELADIYRLADTGAIVSLLSRLAIEKTLSQKLEDARSAVQLRVVKALREYRNLYAVQHRLANRMIYPESLKFLMLYGLALCRSTALRGGYGDVPLDERCAAGHIMMTVSIRRLLKLLYPSLIRLDEYLLKASVQANDLKSVERRLPLTGESLDSRGLYIYDDGIRFIIWFGRVISPDIAKNLLGADFAAELSKTTLSEHDNEMSRRLVKVLEKLRNTDRAYYQLCHLVRQDISTSAAIIIYSFPG 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02145 1002 Gene3D von Willebrand factor, type A domain 433 670 IPR036465 -
Gma19g02145 1002 Pfam Sec23/Sec24 helical domain 768 871 IPR006900 GO:0006886|GO:0006888|GO:0030127
Gma19g02145 1002 Gene3D - 304 756 - -
Gma19g02145 1002 PANTHER OS04G0129500 PROTEIN 28 988 - -
Gma19g02145 1002 CDD Sec24-like 431 672 IPR041742 GO:0006886|GO:0006888|GO:0030127
Gma19g02145 1002 Pfam Sec23/Sec24 beta-sandwich domain 673 757 IPR012990 -
Gma19g02145 1002 MobiDBLite consensus disorder prediction 103 161 - -
Gma19g02145 1002 Pfam Sec23/Sec24 trunk domain 431 667 IPR006896 GO:0006886|GO:0006888|GO:0030127
Gma19g02145 1002 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 885 988 IPR036180 -
Gma19g02145 1002 MobiDBLite consensus disorder prediction 41 58 - -
Gma19g02145 1002 Gene3D - 302 415 - -
Gma19g02145 1002 SUPERFAMILY vWA-like 431 670 IPR036465 -
Gma19g02145 1002 Pfam Sec23/Sec24 zinc finger 357 394 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Gma19g02145 1002 SUPERFAMILY Zn-finger domain of Sec23/24 347 430 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Gma19g02145 1002 MobiDBLite consensus disorder prediction 19 38 - -
Gma19g02145 1002 SUPERFAMILY Helical domain of Sec23/24 768 875 IPR036175 GO:0006886|GO:0006888|GO:0030127
Gma19g02145 1002 MobiDBLite consensus disorder prediction 1 218 - -
Gma19g02145 1002 PANTHER SEC24-RELATED PROTEIN 28 988 - -
Gma19g02145 1002 Gene3D Sec23/Sec24 helical domain 757 875 - -
Gma19g02145 1002 Gene3D Severin 876 992 IPR029006 -
Gma19g02145 1002 MobiDBLite consensus disorder prediction 71 86 - -
Gma19g02145 1002 SUPERFAMILY beta-sandwich domain of Sec23/24 191 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02145 Gma-Chr19 50334626 50343177 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02145 K14007 - gmx:100791083 1839.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02145 19 50334626 50343177 Gma03g02111 03 46652730 46660731 GST
Gma19g02145 19 50334626 50343177 Gma10g01427 10 41329525 41336494 PCT
Gma19g02145 19 50334626 50343177 Gma20g00919 20 35718810 35724780 PCT
Gma10g01427 10 41329525 41336494 Gma19g02145 19 50334626 50343177 PCT
Gma20g00919 20 35718810 35724780 Gma19g02145 19 50334626 50343177 PCT