Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02432 ATGTTTCTTTTCATATTTCTCTCAACCCTCGTTTTAATCGCGGTTCGAGCGAAGAAGCTATGGATAGCAATCGAAGACTGGTTCCACGTGTACCAGTTCTTCAAAGTCCCAGAACTCAACGAAACCACGCAGCATAACCACCTCTACAGGAAGGTCTCCCTCTACTTACATTCCCTACCTTCCATCGAAGACTCTGTCTTCGCCAACCTCATCACTGGCAAGAAGCAAAACGACATCGTCCTCTGCCTCGGCCCCAACCAAACCATCCAAGACCACTTTCTCGGAGCCacactcttctggttcaaccaaaccggaacctttgttctcaagatcagaaaggttgacaagcgccgaatcctccgtccttaccttcagcacattcacgccgtcgccgacgaaatcgaccagcaagggaagcgcgacttgcgcctcttcattaacagcgcccacgacttcggacgctggagatccgttccgttTACGCATCCTTCCACGTTCGACACCATCGCCATGGAACCGGATCTCAAAACCAAGGTCAAGTCCGATCTCGAATCTTTCCTCAGAGCCAAGCAGTACTACCACCGCCTCGGCCGCGTCTGGAAACGGAGCTTCCTCCTCTACGGTCCCTCCGGCACCGGAAAATCGAGCTTCGTCGCCGCCATGGCCAATTTCCTCTCTTACGACGTCTACGAGATCGACCTCTGCAAAATCCCTAACGATTCGGATCTGAAATCGCTCCTCCTCCAATCGACGCCGAAGTCGGTGGTGGTGATCGAGGATCTGGACCGGTTCCTCGCGGACAAAACGGCGAGAATAAGCGCGTCGGGAATACTGAACTTCATGGACGGGCTTTTAACCTCGTGTTGCGCCGAAGAGAGGGTTATGGTGTTCACGATGAACACGAAGGAGCATGTTGACCCGAACCTGCTTCGTCCGGGTCGGGTCGACGTGCATATTCATTTTCCGCTTTGTGATTTTTCGGCGTTTAAAACGCTTGCGAGTAGTTACCTTGGCGTGAAGGAGCATAAGTTGTTTCCTCAGGTGCAGGAGATTTTTCAAAACGGGGCGAGTTTGAGTCCCGCTGAAATCGGTGAGTTGATGATCGCGAACCGGAACTCGCCGAGTCGTGCTATTAAATCGGTCATCACCGCCTTGCAAACGGACGGTGATGGGAGGGGGTGCGGCTTGATCGGACGGCAGACGGATGATGATGAAATGGATGAACCTGATGGGGTTGTGTGCGGTGAGGGTCTCCATACGGTTAAGGATTTGCGGAAACTGTACGATTTTTTCAGGTTCAGGGTTACTAGAAGATCTTCGTCGTCCAATGCTTCCTTGCCCGCAAGCCCATTGCGATAA 1359 0.4489 MFLFIFLSTLVLIAVRAKKLWIAIEDWFHVYQFFKVPELNETTQHNHLYRKVSLYLHSLPSIEDSVFANLITGKKQNDIVLCLGPNQTIQDHFLGATLFWFNQTGTFVLKIRKVDKRRILRPYLQHIHAVADEIDQQGKRDLRLFINSAHDFGRWRSVPFTHPSTFDTIAMEPDLKTKVKSDLESFLRAKQYYHRLGRVWKRSFLLYGPSGTGKSSFVAAMANFLSYDVYEIDLCKIPNDSDLKSLLLQSTPKSVVVIEDLDRFLADKTARISASGILNFMDGLLTSCCAEERVMVFTMNTKEHVDPNLLRPGRVDVHIHFPLCDFSAFKTLASSYLGVKEHKLFPQVQEIFQNGASLSPAEIGELMIANRNSPSRAIKSVITALQTDGDGRGCGLIGRQTDDDEMDEPDGVVCGEGLHTVKDLRKLYDFFRFRVTRRSSSSNASLPASPLR 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02432 452 Pfam Domain associated at C-terminal with AAA 22 100 IPR025753 -
Gma19g02432 452 CDD AAA 201 323 - -
Gma19g02432 452 Pfam ATPase family associated with various cellular activities (AAA) 205 323 IPR003959 GO:0005524|GO:0016887
Gma19g02432 452 PANTHER BCS1 AAA-TYPE ATPASE 9 416 - -
Gma19g02432 452 SMART AAA_5 200 325 IPR003593 -
Gma19g02432 452 Gene3D - 156 319 IPR027417 -
Gma19g02432 452 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 384 IPR027417 -
Gma19g02432 452 PANTHER BNAC04G00800D PROTEIN 9 416 - -
Gma19g02432 452 Gene3D - 320 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02432 Gma-Chr19 52795807 52797691 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02432 - K08900 gmx:100805212 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02432 19 52795807 52797691 Gma19g02432 19 52795807 52797691 ECH
Gma19g02432 19 52795807 52797691 Gma16g00193 16 2064569 2066449 ECH
Gma19g02432 19 52795807 52797691 Gma03g02386 03 48968082 48969844 GST
Gma19g02432 19 52795807 52797691 Gma07g00496 07 4687701 4689606 PCT
Gma19g02432 19 52795807 52797691 Gma16g00193 16 2064569 2066449 PCT
Gma07g00496 07 4687701 4689606 Gma19g02432 19 52795807 52797691 PCT
Gma16g00193 16 2064569 2066449 Gma19g02432 19 52795807 52797691 PCT