Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00496 ATGTCTGGTTACAGCCCTATGTTCCTCGTAATCCTCAGTGTCGTCGTAGGTTTCACGATTCGGTGGTTCCTGTTCAAAACGGGATTGATACACACCATAAGAATACGCTTCCCAAGGGTCGTGGATTGGTTCCACGTGTACCAGTTCCTCAAAGTCCCCGAATTTAACGAAACCAATATGCAGCCGAATAACCTTCACCGCAAAGTTTCTCTCTATTTGCATTCCCTCCCTTCAATAGAAGACGCTGACTACACCAATCTCATAACCGCTAATGACCAAAGCGACATCGTTTTGCGCCTCGACCCGAACCAAACCATCGAGGACCGCTTCCTCGGGGCCAGACTCTATTGGTTCAACCAAAAAACCGAACCGAACCGGATTTCCTCCTTCGTTCTCCAAATCAGAAAAACTGATAAACGCCGCATCCTCCGCCAGTACCTCCGCCACATCGACACCATCGCCGACGAGATGAACAACCAAAGCAAGCGCCATTTACGGCTGTTCATGAACGCCGGCGCCGGCGGAGGAACACGGTGGAGATCCGTTCCGTTTACTCATCCGGCGACGTTTGAAACGAtggcgatggagaaggatctcaagaacaagatcaaatcagatctcgaatcgtttctcaaggcgaagcagtattaccggaaactcggccgcgcgtggaagaggagctatctcttGTATGGTGCCTCCGGCACCGGAAAATCGAGCTTCGTCGCCGCGATGGCGAACTTCCTCCGCTACGACGTGTACGACGTGGATCTCTCCAAGATTCGCGGCGATTCGGATCTGAAGTTTCTGTTGACGGAAACGACGGCGAAGTCGGTAATCCTGGTGGAGGATCTGGACCGGTTTATGGAACCAGAATCGGAGACAGCGACGGCGGTTACCGCGTCGGGAATCCAGAGCTTCATGGACGGGATCGTTAGCGCGTGTTGCGGCGAGGAGAGGGTGATGGTGTTCACGATGAACAGCAAGGAGTGCGTGGACCCGAACCTGCTGCGGCCGGGTCGGGTCGACGTCCACATCCACTTTCCGGTGTGCGATTTCTCGGCGTTCAAGACGCTGGCGAGCAGCTACCTCGGCGTGAGGGAGCACAAGCTGTTCGCGCAGGTGGAGGATATTTTCCGGCACGGTGCGACTCTCAGCCCCGCCGAGATCAGCGAGTTGATGATCGCGAACCGGAACTCGCCGAGTCGCGCCATCAAATCGGTGATCGGGGCGCTGCAATCGGACGGTGAAGGGAGAAGATCGTACGCGGATTCAATCGGACGGCGGATAGAGGGTGATGACGTGGACGAAGCGCCCTGTGGTGGGGACGGGTTCTCTACGGTTAAGGATTTAAGGAAGTTTTACGGTTTCTTCAAATTGCGGAACCCCAGAAGAACTCCTCGCCCCATGATAGATAATGATGAAAGATGA 1431 0.5052 MSGYSPMFLVILSVVVGFTIRWFLFKTGLIHTIRIRFPRVVDWFHVYQFLKVPEFNETNMQPNNLHRKVSLYLHSLPSIEDADYTNLITANDQSDIVLRLDPNQTIEDRFLGARLYWFNQKTEPNRISSFVLQIRKTDKRRILRQYLRHIDTIADEMNNQSKRHLRLFMNAGAGGGTRWRSVPFTHPATFETMAMEKDLKNKIKSDLESFLKAKQYYRKLGRAWKRSYLLYGASGTGKSSFVAAMANFLRYDVYDVDLSKIRGDSDLKFLLTETTAKSVILVEDLDRFMEPESETATAVTASGIQSFMDGIVSACCGEERVMVFTMNSKECVDPNLLRPGRVDVHIHFPVCDFSAFKTLASSYLGVREHKLFAQVEDIFRHGATLSPAEISELMIANRNSPSRAIKSVIGALQSDGEGRRSYADSIGRRIEGDDVDEAPCGGDGFSTVKDLRKFYGFFKLRNPRRTPRPMIDNDER 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00496 476 Gene3D - 180 350 IPR027417 -
Gma07g00496 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 408 IPR027417 -
Gma07g00496 476 Pfam Domain associated at C-terminal with AAA 31 118 IPR025753 -
Gma07g00496 476 Pfam ATPase family associated with various cellular activities (AAA) 229 349 IPR003959 GO:0005524|GO:0016887
Gma07g00496 476 PANTHER BCS1 AAA-TYPE ATPASE 7 436 - -
Gma07g00496 476 CDD AAA 225 349 - -
Gma07g00496 476 PANTHER BNAC04G00800D PROTEIN 7 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00496 Gma-Chr7 4687701 4689606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00496 183 394 Miscellaneous Gene Families AT5G53170 25.000 7.45e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00496 - K08900 gmx:100787809 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00496 07 4687701 4689606 Gma07g00496 07 4687701 4689606 ECH
Gma07g00496 07 4687701 4689606 Gma03g02386 03 48968082 48969844 ECH
Gma07g00496 07 4687701 4689606 Gma16g00193 16 2064569 2066449 GST
Gma19g02432 19 52795807 52797691 Gma07g00496 07 4687701 4689606 PCT
Gma03g02386 03 48968082 48969844 Gma07g00496 07 4687701 4689606 PCT
Gma07g00496 07 4687701 4689606 Gma19g02432 19 52795807 52797691 PCT
Gma07g00496 07 4687701 4689606 Gma03g02386 03 48968082 48969844 PCT