Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02386 ATGATTCTTTTCAGTTTCACCTCCATCGTTTTAATCGCGTTTGGGGCGACGCTGTTCCAGACGGGGCATGCGAAGAAGCTATGGAGAAGAATCGAAGACTGGTTCCACGTGTACCAGTTCTTCAAAGTCCCAGAACTCAACGACACGACGCAGCACAACCACCTATACAGGAAGGTCTCCCTCTACTTACATTCCCTACCTTCCATCGAAGACTCTGACTTCGCCAACCTCATCACTGGCAAGAAGCAAAACGACATCGTCCTCTGCCTCGGCCCAAACCAAACTATCGAGGACCATTTTCTCGGAGCCacactcttctggttcaaccaaaccggaacctttcttctcaagatcagaaaggtggacaagcggagaatcctccgtccttaccttcagcacattcacgccgtcgccgacgaaatcgaccagcgagggaagcgcgacttgcttctcttcatgaacatcgccgacgactaccgacgctggagatccgttccgttCACGCATCCTTCCACGttcgacaccgtcgccatggagccggatctcaaaagcaaagttaaatccgatctcgaatcgttcctcagagcgaagcagtactaccaccgcctcggccgcgtctggaaacggagcttcctcctCTACGGTCCCTCCGGCACCGGAAAATCGAGCTTCGTCGCCGCCATGGCCAATTTCCTCTCCTACGACGTCTACGACATCGACCTCTGCAAAATCTCCAGCGATTCGGATCTGAAATCGCTCCTCCTGCAAACGACGCCGAAGTCGGTGGTGGTGATCGAGGACCTGGACCGGTTCCTCGCGGAGAAAACGGCAAGAATAAGCGCGTCGGGGATACTGAACTTCATGGACGCGCTTCTAACCTCGTGTTGCGCTGAAGAGAGGGTTATGGTGTTCACGATGAACACGAAGGAGCATGTTGACCCAAACCTGCTTCGACCGGGTCGGGTCGACGTGCATATTCATTTTCCGCTTTGTGATTTTTCGGCGTTTAAGACGCTTGCGAGTAGTTACCTTGGGGTGAAGGAGCATAAGTTGTTTCCTCAGGTGCAGGAGATTTTTCAAAACGGGGCGAGTTTGAGTCCCGCTGAAATCGGTGAGTTGATGATAGCAAACCGGAACTCACCGAGTCGGGCTATTAAATCGGTTATCACCGCCTTGCAAACGGACGGTGATGGGAGGGGGTGCGGCTTGATCGGACGGCAGACGGAGGACGATGAAATGGATGAACCTGACGGGGTTGTGTGCGGTGAGACTTTCAATACGGTTAAGGATTTGCGGAAACTGTACGGTTTTTTCAGTTTCAGGGTTACTAGAAGATCTTCGTCGTCCAATGCTTCCTTGCCCCCCGCAAGCCCATTGGAAAAAGAATAA 1389 0.4039 MILFSFTSIVLIAFGATLFQTGHAKKLWRRIEDWFHVYQFFKVPELNDTTQHNHLYRKVSLYLHSLPSIEDSDFANLITGKKQNDIVLCLGPNQTIEDHFLGATLFWFNQTGTFLLKIRKVDKRRILRPYLQHIHAVADEIDQRGKRDLLLFMNIADDYRRWRSVPFTHPSTFDTVAMEPDLKSKVKSDLESFLRAKQYYHRLGRVWKRSFLLYGPSGTGKSSFVAAMANFLSYDVYDIDLCKISSDSDLKSLLLQTTPKSVVVIEDLDRFLAEKTARISASGILNFMDALLTSCCAEERVMVFTMNTKEHVDPNLLRPGRVDVHIHFPLCDFSAFKTLASSYLGVKEHKLFPQVQEIFQNGASLSPAEIGELMIANRNSPSRAIKSVITALQTDGDGRGCGLIGRQTEDDEMDEPDGVVCGETFNTVKDLRKLYGFFSFRVTRRSSSSNASLPPASPLEKE 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02386 462 PANTHER BNAC04G00800D PROTEIN 6 429 - -
Gma03g02386 462 Pfam Domain associated at C-terminal with AAA 25 107 IPR025753 -
Gma03g02386 462 Gene3D - 163 326 IPR027417 -
Gma03g02386 462 Pfam ATPase family associated with various cellular activities (AAA) 212 330 IPR003959 GO:0005524|GO:0016887
Gma03g02386 462 Gene3D - 327 393 - -
Gma03g02386 462 SMART AAA_5 207 332 IPR003593 -
Gma03g02386 462 CDD AAA 208 330 - -
Gma03g02386 462 PANTHER BCS1 AAA-TYPE ATPASE 6 429 - -
Gma03g02386 462 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 391 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02386 Gma-Chr3 48968082 48969844 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02386 - K08900 gmx:100776680 887.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02386 03 48968082 48969844 Gma03g02386 03 48968082 48969844 ECH
Gma07g00496 07 4687701 4689606 Gma03g02386 03 48968082 48969844 ECH
Gma19g02432 19 52795807 52797691 Gma03g02386 03 48968082 48969844 GST
Gma03g02386 03 48968082 48969844 Gma07g00496 07 4687701 4689606 PCT
Gma03g02386 03 48968082 48969844 Gma16g00193 16 2064569 2066449 PCT
Gma07g00496 07 4687701 4689606 Gma03g02386 03 48968082 48969844 PCT
Gma16g00193 16 2064569 2066449 Gma03g02386 03 48968082 48969844 PCT