Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00193 ATGTTCCTCGTAATCCTAAGTGTCGTCGTAGGTTTCACGGTTCGGTGGTTGCTGTTCAAAACGGGATTGATGCACACCATAAGAAAACGCTTCCGAAGGGTCGTGGATTGGTGCCACGTGTACCAGTTCCTCAAAGTCCCCGAATTCAACGAAACCAATAATATGCGGCGGAATAACCTTCACCGCAAAGTTTCTCTCTATTTGCATTCCCTTCCTTCCATAGAGGACGCTGACTTCACCAATCTCATAACCGGAAATGACCAAACTGACATCGTTTTGCGCCTCGACCCGAACCAAACCATCGAGGACCGCTTCCTTGGTGCCACACTCTATTGGTTCAACCAAAAAACCGAACCGAACCGGATTTCCACCTTCGTTCTCCAAATCAGAAAAACCGATAAACGTCGCATCCTTCGCCAGTACCTCCGCCACATCAACACTGTCGCCGACGAGATGGAGAACCAAAGCAAGCGCAATTTACGGTTGTTCATGAACGCCTCCGCCGTCGAAGACGGCGGCACACGGTGGAGATCCGTTCCGTTTACTCATCCGGCGATGTTTGAAACGATGGCGATGGAGAAGGATCTGAAGAACAAGATCAAGTCAGATCTCGAATCGTTTCTCAAGGCGAAGCAGTATTACCGGAAAATCGGCCGGGCGTGGAAGCGGAGCTACCTCCTGTACGGTGCCGGAGGCACCGGAAAATCCAGCTTCGTCGCCGCGATGGCTAACTTTCTCCGCTACGACGTGTACGACGTGGATCTCTCCAAGATTCGCGGCGATTCGGATCTGATGTTTCTGTTAACGGAAACGACGGCGAAATCGGTAATCGTGGTGGAGGATCTCGACCGGTTTCTGGAACCGGAGCCGGAGACAGCGACGGCGGTTACCGCGTCGGGGATCCAGAGCTTCATGGACGGAATCGTTAGCGCGTGTTGTGGCGAGGAGAGGGTGATGGTGTTCACGATGAACAGCAAGGAGTGCGTGGACCCGGACCTGCTGCGGCCGGGTCGGGTCGACGTGCACATCCACTTCCCGGTGTGCGATTTCTCGGCGTTCAAGACGCTGGCGAGCAGCTACCTCGGCGTGAGGAAGCACAAGCTGTTCGCGCAGGTGGAGGAGATTTTCCGGCACGGCGCGACTCTCAGCCCCGCGGAGATCAGCGAGTTGATGATCGCGAATCGGACCTCGCCGAGTCGCGCCATCAAATCGGTGATCGGGGCGCTGCAATCGGACGGTGATGGGAGAAGATCGTATGCTGATTCGATCAGACGGCGGATAGAGGGTGATGACGTGGACAAAGCGCCCTGTGGTGGGGACGGGTTCTCTACGGTTAAAGATATCCGGAAGTTGTACGGTTTCTTCAAATTGCGGAACGGCAGAAGAACTTCTCAACAACAGTCTAATTCCTCTCCCCATGATACTTGA 1428 0.5441 MFLVILSVVVGFTVRWLLFKTGLMHTIRKRFRRVVDWCHVYQFLKVPEFNETNNMRRNNLHRKVSLYLHSLPSIEDADFTNLITGNDQTDIVLRLDPNQTIEDRFLGATLYWFNQKTEPNRISTFVLQIRKTDKRRILRQYLRHINTVADEMENQSKRNLRLFMNASAVEDGGTRWRSVPFTHPAMFETMAMEKDLKNKIKSDLESFLKAKQYYRKIGRAWKRSYLLYGAGGTGKSSFVAAMANFLRYDVYDVDLSKIRGDSDLMFLLTETTAKSVIVVEDLDRFLEPEPETATAVTASGIQSFMDGIVSACCGEERVMVFTMNSKECVDPDLLRPGRVDVHIHFPVCDFSAFKTLASSYLGVRKHKLFAQVEEIFRHGATLSPAEISELMIANRTSPSRAIKSVIGALQSDGDGRRSYADSIRRRIEGDDVDKAPCGGDGFSTVKDIRKLYGFFKLRNGRRTSQQQSNSSPHDT 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00193 475 Gene3D - 177 347 IPR027417 -
Gma16g00193 475 CDD AAA 222 346 - -
Gma16g00193 475 Pfam Domain associated at C-terminal with AAA 20 113 IPR025753 -
Gma16g00193 475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 404 IPR027417 -
Gma16g00193 475 PANTHER BNAC04G00800D PROTEIN 4 439 - -
Gma16g00193 475 Pfam ATPase family associated with various cellular activities (AAA) 226 346 IPR003959 GO:0005524|GO:0016887
Gma16g00193 475 PANTHER BCS1 AAA-TYPE ATPASE 4 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00193 Gma-Chr16 2064569 2066449 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00193 - K08900 gmx:100792584 952.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00193 16 2064569 2066449 Gma16g00193 16 2064569 2066449 ECH
Gma19g02432 19 52795807 52797691 Gma16g00193 16 2064569 2066449 ECH
Gma07g00496 07 4687701 4689606 Gma16g00193 16 2064569 2066449 GST
Gma19g02432 19 52795807 52797691 Gma16g00193 16 2064569 2066449 PCT
Gma03g02386 03 48968082 48969844 Gma16g00193 16 2064569 2066449 PCT
Gma16g00193 16 2064569 2066449 Gma19g02432 19 52795807 52797691 PCT
Gma16g00193 16 2064569 2066449 Gma03g02386 03 48968082 48969844 PCT