Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02262 ATGGACAACAAAACCGATTTCTCAAGTCCTCTTCTCCCCACAAGTTACGGTCCCAATGATGCCGTTGACTCTCAGGGCAAAGGCCCTTCTTCTTCTTCCATACCAACTACTCTTATAATCACTACCCTCGTCGCTGTTTTTGGTTCTTACGTTTTTGGCTCTGCTATTGGGTATTCATCACCTACTCAATCTGCAATCATGCGTGACCTCAATCTCGGAGTGGCCCAGTACTCAATTTTTGGTTCAATATTGACGATTGGAGCCATGATTGGTGCCGTTGTGAGTGGTAGAATAGCTGATTATGCTGGTCGTCGAGTTGCCATGGGATTCTCCCAGGTTTTCTGCATCTTGGGATGGCTTGCCATAACATTCTCAAAGGTTGCTTGGTGGctttatgttggaagactgttggtaggatgtgggattggccttctatcttatgtggtaccagtttatgtagcagaaataacacccaagaatcttcgaggggcattcactgcagttcatcagTTAATGATTTGTTGTGGGATGTCATTAACTTATCTTATTGGAGCATATGTGAATTGGCGGATCTTGGCTACAATAGGAATTATTCCGTGTCTTGTGCAGCTTCTGAGTCTTCCCTTCATCCCTGATTCTCCTAGGTGGCTGGCTAAGGCTGGTCGCTTGAAAGAGAGTGATTCTGCTTTACAGCGCCTCAGGGGGAAGAATGCTGATGTTTATCAAGAGGCCACTGAAATCAGAGATCATACAGAAGCCTTTCAAAAGCAAACAGAAGCTAGCATCATTGGCTTATTTCAAATGCAATATTTGAAGTCACTTACCGTAGGAGTTGGCTTGATGATACTGCAACAGTTTGGAGGGATTAATGGCATTGTTTTTTATGCAAACTCTATATTTATATCTTCTGGGTTTTCAGAAAGTATTGGAACAATAGCAATTGTTGCCGTTAAGATTCCAATGACAACTATAGGAGTACTTTTAATGGATAAATCTGGAAGACGACCACTTTTGCTGGTGTCTGCAGTGGGAACATGCGTAGGATGCTTCCTGGCAGCCTTGTCATTCGTTTTGCAGGACTTGCATAAGTGGAAAGGAGTTAGTCCCATTTTGGCGCTAGTGGGTGTATTGGTATACGTGGGATCTTACTCTATAGGCATGGGAGCAATTCCGTGGGTTATAATGTCTGAGATATTTCCCATCAACGTGAAGGGTTCTGCTGGAAGCCTTGTGACTTTGGTTAGCTGGTTGTGTTCCTGGATTATATCATATGCTTTTAACTTCCTCATGAGTTGGAGTTCAGCAGGAACTTTCTTCATGTTCTCTGGCATATGTGGCTTCACTGTGCTATTCGTAGCAAAACTAGTACCAGAGACCAAGGGCCGTACACTAGAAGAAATTCAAGCTTCTCTGAATTCATATTCTTCTAAGAGATGA 1437 0.396 MDNKTDFSSPLLPTSYGPNDAVDSQGKGPSSSSIPTTLIITTLVAVFGSYVFGSAIGYSSPTQSAIMRDLNLGVAQYSIFGSILTIGAMIGAVVSGRIADYAGRRVAMGFSQVFCILGWLAITFSKVAWWLYVGRLLVGCGIGLLSYVVPVYVAEITPKNLRGAFTAVHQLMICCGMSLTYLIGAYVNWRILATIGIIPCLVQLLSLPFIPDSPRWLAKAGRLKESDSALQRLRGKNADVYQEATEIRDHTEAFQKQTEASIIGLFQMQYLKSLTVGVGLMILQQFGGINGIVFYANSIFISSGFSESIGTIAIVAVKIPMTTIGVLLMDKSGRRPLLLVSAVGTCVGCFLAALSFVLQDLHKWKGVSPILALVGVLVYVGSYSIGMGAIPWVIMSEIFPINVKGSAGSLVTLVSWLCSWIISYAFNFLMSWSSAGTFFMFSGICGFTVLFVAKLVPETKGRTLEEIQASLNSYSSKR 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02262 478 ProSitePatterns Sugar transport proteins signature 1. 95 111 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma19g02262 478 Gene3D MFS general substrate transporter like domains 30 473 IPR036259 -
Gma19g02262 478 PANTHER GENERAL SUBSTRATE TRANSPORTER 15 474 - -
Gma19g02262 478 Pfam Sugar (and other) transporter 42 469 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gma19g02262 478 MobiDBLite consensus disorder prediction 1 32 - -
Gma19g02262 478 PANTHER - 15 474 - -
Gma19g02262 478 SUPERFAMILY MFS general substrate transporter 37 468 IPR036259 -
Gma19g02262 478 CDD MFS_GLUT6_8_Class3_like 39 466 IPR044775 GO:0008643|GO:0051119
Gma19g02262 478 ProSiteProfiles Major facilitator superfamily (MFS) profile. 41 460 IPR020846 GO:0022857
Gma19g02262 478 TIGRFAM SP: MFS transporter, sugar porter (SP) family 40 467 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma19g02262 478 PRINTS Sugar transporter signature 49 59 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma19g02262 478 PRINTS Sugar transporter signature 132 151 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma19g02262 478 PRINTS Sugar transporter signature 284 294 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma19g02262 478 PRINTS Sugar transporter signature 373 394 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma19g02262 478 PRINTS Sugar transporter signature 396 408 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02262 Gma-Chr19 51302577 51306672 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02262 18 402 Organic Solute Cotransporters AT1G54730 64.675 2.16e-174 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02262 K03444 - gmx:100817150 929.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02262 19 51302577 51306672 Gma03g02222 03 47543738 47548434 ECH
Gma03g01373 03 39893641 39898099 Gma19g02262 19 51302577 51306672 ECH
Gma19g01439 19 43647976 43655777 Gma19g02262 19 51302577 51306672 ECH
Gma19g02262 19 51302577 51306672 Gma19g02262 19 51302577 51306672 ECH
Gma19g02262 19 51302577 51306672 Gma03g02222 03 47543738 47548434 GST