Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02222 ATGGACAACAAAACCGATTTTTCAACTCCTCTTCTCCCCACAAGCTACGGTCCCGTTGACTCTCAGGGGAAAGGCCATACCGGACCTTCTTCTTCTTCTTCTTTTTCTTCCATACCAACTACTCTTATACTCACTACCCTCGTCGCTGTTTTTGGTTCTTACGTTTTTGGCTCCGCTATTGGGTATTCATCACCTACTCAATCTAGAATCATGCTTGACCTCAATCTCGGAGTCGCCCAGTACTCAATTTTTGGTTCAATATTGACGATTGGAGCGATGATTGGTGCCGTTGTGAGTGGTAGAATAGCAGATTATGCTGGTCGTCGAGTTGCCATGGGATTCTCCCAGGTTTTCTGCATCTTGGGATGGCTTGCCATAACATTCTCAAAGGTTGCTTGGTGGctttatgttggaagactgttggtaggatgtgggattggccttctatcttatgtggtaccagtttatgtagcagaaataacacccaagaatcttcgaggggcattcactgcagttcatcagTTAATGATTTGTTGTGGGATGTCATTGACTTATCTTATTGGAGCATATGTGAATTGGCGGATCTTGGCTACAATAGGAATTATTCCGTGTCTTGTGCAACTTCTGAGTCTTCCCTTCATCCCTGATTCTCCTAGGTGGCTGGCTAAGGTTGGTCGCTTGAAAGAGAGTGATTCTGCTTTACAGCGCCTCAGGGGGAAGAATGCCGATTTTTATCAAGAGGCCACTGAAATCAGAGATTATACAGAAGCCTTTCAGAAGCAAACAGAAGCTAGCATCATTGGCTTATTTCAAATACAATATTTGAAGTCACTTACCGTAGGGGTCGGCTTGATGATACTGCAACAGTTTGGAGGGATTAATGCCATTGTTTTTTATGCAAACTCTATATTTATCTCTTCTGGGTTTTCAGAAAGTATCGGAACAATAGCAATCGTTGCCGTTAAGATTCCAATGACAACTATAGGAGTACTTTTAATGGATAAATCTGGAAGACGACCACTTTTGCTGGTGTCTGCAGTGGGAACATGCGTAGGATGCTTCCTGGCAGCCTTGTCATTCATTTTGCAGGACTTACATAAGTGGAAAGGAGTTAGTCCAATTTTGGCACTAGTGGGTGTACTGGTATACGTGGGATCTTACTCTATAGGTATGGGAGCAATTCCGTGGGTTATAATGTCAGAGATATTTCCCATCAACGTGAAGGGTTCTGCTGGAAGCCTTGTGACTTTGGTTAGCTGGCTGTGTTCTTGGATTATATCATATTCTTTTAACTTCCTCATGAGTTGGAGTTCAGCAGGAACTTTCTTAATGTTCTCTAGCATATGTGGCTTCACTGTGCTATTCGTAGCAAAACTAGTACCAGAGACCAAGGGGCGTACACTAGAAGAAATTCAAGCTTCTTTGAACTCATTTTCTTCTAAGAGATAG 1449 0.3927 MDNKTDFSTPLLPTSYGPVDSQGKGHTGPSSSSSFSSIPTTLILTTLVAVFGSYVFGSAIGYSSPTQSRIMLDLNLGVAQYSIFGSILTIGAMIGAVVSGRIADYAGRRVAMGFSQVFCILGWLAITFSKVAWWLYVGRLLVGCGIGLLSYVVPVYVAEITPKNLRGAFTAVHQLMICCGMSLTYLIGAYVNWRILATIGIIPCLVQLLSLPFIPDSPRWLAKVGRLKESDSALQRLRGKNADFYQEATEIRDYTEAFQKQTEASIIGLFQIQYLKSLTVGVGLMILQQFGGINAIVFYANSIFISSGFSESIGTIAIVAVKIPMTTIGVLLMDKSGRRPLLLVSAVGTCVGCFLAALSFILQDLHKWKGVSPILALVGVLVYVGSYSIGMGAIPWVIMSEIFPINVKGSAGSLVTLVSWLCSWIISYSFNFLMSWSSAGTFLMFSSICGFTVLFVAKLVPETKGRTLEEIQASLNSFSSKR 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02222 482 Gene3D MFS general substrate transporter like domains 35 477 IPR036259 -
Gma03g02222 482 PANTHER - 13 478 - -
Gma03g02222 482 Pfam Sugar (and other) transporter 46 473 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gma03g02222 482 MobiDBLite consensus disorder prediction 1 36 - -
Gma03g02222 482 PRINTS Sugar transporter signature 53 63 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma03g02222 482 PRINTS Sugar transporter signature 136 155 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma03g02222 482 PRINTS Sugar transporter signature 288 298 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma03g02222 482 PRINTS Sugar transporter signature 377 398 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma03g02222 482 PRINTS Sugar transporter signature 400 412 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma03g02222 482 PANTHER GENERAL SUBSTRATE TRANSPORTER 13 478 - -
Gma03g02222 482 ProSitePatterns Sugar transport proteins signature 1. 99 115 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma03g02222 482 CDD MFS_GLUT6_8_Class3_like 43 470 IPR044775 GO:0008643|GO:0051119
Gma03g02222 482 ProSiteProfiles Major facilitator superfamily (MFS) profile. 45 464 IPR020846 GO:0022857
Gma03g02222 482 TIGRFAM SP: MFS transporter, sugar porter (SP) family 43 471 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma03g02222 482 SUPERFAMILY MFS general substrate transporter 46 472 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02222 Gma-Chr3 47543738 47548434 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02222 48 406 Organic Solute Cotransporters AT1G54730 67.131 1.03e-172 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02222 K03444 - gmx:100780074 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02262 19 51302577 51306672 Gma03g02222 03 47543738 47548434 ECH
Gma03g01373 03 39893641 39898099 Gma03g02222 03 47543738 47548434 ECH
Gma19g01439 19 43647976 43655777 Gma03g02222 03 47543738 47548434 ECH
Gma03g02222 03 47543738 47548434 Gma03g02222 03 47543738 47548434 ECH
Gma19g02262 19 51302577 51306672 Gma03g02222 03 47543738 47548434 GST