Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01373 ATGGCAATCAAAGAAGATGTGGAGGATCGCACACAGAAAGGAATCAGAGAGCCACTTGTTGTGGGGGAACAGAATCACCATGCAAACAAAGGGCATCCATGGATGGTTTACTTCAGTACATTTATTGCAGTGTGTGGCTCTTATGAATTTGGGGCCTGTGCTGGATATTCATCTCCCACCCAAGATGCTATCAGGAAGGATCTCAGTCTGTCTTTGGCAGAGTACTCCTTGTTTGGATCCATCTTGACTTTTggtgcaatggttggtgcaataacaagtggacctcttgctgattttattggacgtaaagggGCAATGAGAGTGTCAAGTGCTTTCTGTGTCGCAGGGTGGCTTGTTATTTATTTTTCTGAGGGTCCAGTGCCTTTGGACATTGGGAGGTTAGCAACAGGATATGGAATGGGAGTTTTTTCATATGTGGTTCCTGTCTTTGTAGCAGAAATTGCACCAAAAGAACTCCGAGGGGCACTGACTACCTTAAATCAGTTCATGATAGTTACTGCTGTGTCTGTGTCATTCATAATTGGAAATGTACTTTCATGGAGGGCTTTAGCTATAATTGGTCTCGTTCCCACTGCTGTGTTGCTTTTGGGTCTGTTTTTCATTCCGGAGTCTCCTAGATGGCTGGCAAAGAGAGGACATAAAAAAGATTTTGTGGCAGCACTGCAAATACTTCGTGGCAAAGATGCTGATATATCTGAGGAGGCAGAGGAAATTCAGGATTATATAACTAGTTTGGAGCAGCTCCCAAAATCCAGTCTGCTGGGATTATTTCATAGAAGATATTTGCGCTCAGTCACTATTGGAATAGGCCTTATGGTCTGCCAGCAGTTTGGGGGAATCAATGGAATTTGCTTTTATGCCAGCAGTATTTTTGAACAAGCAGGATTTTCTCCGACCATTGGGACTATAACATATGCTTGCCTTCAGATTGTGATCACAGGTCTTGGAGCAGCCTTCATAGATAAAGCTGGCAGGAAGCCCTTACTTCTGTTATCTGGATCTGGATTAGTCGCAGGATGTATATTTGCAGCAGTTGCATTCTATCTCAAGGTTCACGAGGTGGGTGTTGAGGCAGTCCCAGCGCTTGCCGTAACAGGCATACTGGTCTACATAGGATCATTTTCAATAGGAATGGGAGCAATTCCATGGGTTGTGATGTCTGAGATATTTCCTGTCAATGTTAAAGGGCTAGCAGGAAGTGTGGCCACATTAACTAACTGGTTTGGTGCATGGTTATGTTCCTATACTTTCAACTTCCTCATGAGCTGGAGCTCCTATGGTACCTTCATCCTTTATGCTGCAATTAATGCACTGGCTATATTATTTATAATTGTTGCGGTGCCAGAAACCAAGGGTAAAAGCTTGGAACAATTACAAGCAGACATTAACTCATAG 1416 0.416 MAIKEDVEDRTQKGIREPLVVGEQNHHANKGHPWMVYFSTFIAVCGSYEFGACAGYSSPTQDAIRKDLSLSLAEYSLFGSILTFGAMVGAITSGPLADFIGRKGAMRVSSAFCVAGWLVIYFSEGPVPLDIGRLATGYGMGVFSYVVPVFVAEIAPKELRGALTTLNQFMIVTAVSVSFIIGNVLSWRALAIIGLVPTAVLLLGLFFIPESPRWLAKRGHKKDFVAALQILRGKDADISEEAEEIQDYITSLEQLPKSSLLGLFHRRYLRSVTIGIGLMVCQQFGGINGICFYASSIFEQAGFSPTIGTITYACLQIVITGLGAAFIDKAGRKPLLLLSGSGLVAGCIFAAVAFYLKVHEVGVEAVPALAVTGILVYIGSFSIGMGAIPWVVMSEIFPVNVKGLAGSVATLTNWFGAWLCSYTFNFLMSWSSYGTFILYAAINALAILFIIVAVPETKGKSLEQLQADINS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01373 471 ProSiteProfiles Major facilitator superfamily (MFS) profile. 35 458 IPR020846 GO:0022857
Gma03g01373 471 PANTHER - 32 469 - -
Gma03g01373 471 SUPERFAMILY MFS general substrate transporter 31 466 IPR036259 -
Gma03g01373 471 ProSitePatterns Sugar transport proteins signature 1. 323 340 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma03g01373 471 Gene3D MFS general substrate transporter like domains 29 470 IPR036259 -
Gma03g01373 471 ProSitePatterns Sugar transport proteins signature 1. 93 110 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma03g01373 471 PRINTS Sugar transporter signature 130 149 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma03g01373 471 PRINTS Sugar transporter signature 282 292 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma03g01373 471 PRINTS Sugar transporter signature 371 392 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma03g01373 471 PRINTS Sugar transporter signature 394 406 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma03g01373 471 PANTHER SUGAR TRANSPORTER ERD6-LIKE 7 32 469 - -
Gma03g01373 471 CDD MFS_GLUT6_8_Class3_like 37 464 IPR044775 GO:0008643|GO:0051119
Gma03g01373 471 Pfam Sugar (and other) transporter 47 467 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gma03g01373 471 TIGRFAM SP: MFS transporter, sugar porter (SP) family 34 464 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01373 Gma-Chr3 39893641 39898099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01373 1 470 Organic Solute Cotransporters AT5G18840 58.455 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01373 K03444 - gmx:100785248 914.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01373 03 39893641 39898099 Gma19g02262 19 51302577 51306672 ECH
Gma03g01373 03 39893641 39898099 Gma03g02222 03 47543738 47548434 ECH
Gma03g01373 03 39893641 39898099 Gma03g01373 03 39893641 39898099 ECH
Gma03g01373 03 39893641 39898099 Gma19g01439 19 43647976 43655777 ECH