Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01439 ATGGCGATCAAAGAAGATGTGGAGGAAGGCATGCAGAAAGGAGTCAGAGAGCCACTGGTGGTCCGTGCAAGCAAAGGGCATCCATGGATGGTTTACTTTACTACATTCGTTGCAGTGTGTGGTTCTTATGAATTTGGAGCTTGTGCGGGATATTCATCTCCCACTCAAGATGCTATCAGGAAGGATTTTAGTCTGTCTTTGGCAGAGTACTCCTTGTTTGGATCCATCTTGACTTTTggtgcaatggttggcgcaataacaagtgggcctatagccgattttattggacggaaagggGCAATGAGAGTGTCAAGTGCTTTCTGTGTCGCAGGGTGGCTAGTTATTTACTTTGCTGAGGGCCCAGTGTATTTGGACATTGGGAGGCTATCAACAGGATATGGAATGGGAGTTTTTTCATATGTGGTTCCTGTCTTTGTAGCAGAAATTGCACCAAAAGAACTTCGAGGGACCCTGACTACCTTAAATCAGTTCATGATCACGGCTGCGGTGTCAGTGTCATTCACAATTGGAAACGTGTTTTCATGGAGGGTTTTAGCTATAATTGGCCTCATTCCCACTGCTGTATTGCTTTTGGGTCTGTTTTTCATTCCGGAGTCTCCTAGATGGCTGGCAAAGAGAGGACGTGAAAAAGATTTTGTGGCAGCACTGCAAATACTTCGTGGCAACGATGCTGATATATCTGAGGAGGCAGAGGAAATTCAGGATTATATAACTACTTTGGAGCGGCTCCCAAAATCCAGGCTGCTGGAATTGTTTCATAGAAGATATTTGCGCTCAGTCACTATTGGAATAGGCCTTATGGTCTGCCAGCAGTTTGGGGGAATCAATGGAATTTGCTTTTATACCAGCAGTATTTTTGAACTAGCAGGATTTTCTCCGACCATCGGGACTATTACATATGCCTGCCTTCAGATTGTGATCACAGGTCTTGGAGCAGCCTTAATAGATAAAGCTGGCAGGAAGCCCCTTCTTCTATTATCCGGATCGGGATTGGTCGCAGGATGCACATTTGTAGCAGTTGCATTCTATCTCAAGGTTCACGAGGTTGGTGTTGAGGCAGTCCCAGCACTTGCCGTAACTGGCATACTGGTCTACATAGGATCATTTTCAATAGGAATGGGAGCAATTCCTTGGGTTGTGATGTCTGAGATATTTCCTGTCAATATTAAAGGGCTGGCAGGAAGTGTGGCCACATTAGTGAACTGGTTTGGTGCATGGTTATGTTCCTATACTTTCAACTTCTTCATGAGCTGGAGCTCCTATGGTACCTTCATCCTTTATGCAGCAATTAATGCACTGGCTATATTGTTTATAATTGTTGCGGTGCCAGAAACCAAGGGGAAAAGCTTGGAACAATTACAAGCAGACATTAACTCATAG 1401 0.4254 MAIKEDVEEGMQKGVREPLVVRASKGHPWMVYFTTFVAVCGSYEFGACAGYSSPTQDAIRKDFSLSLAEYSLFGSILTFGAMVGAITSGPIADFIGRKGAMRVSSAFCVAGWLVIYFAEGPVYLDIGRLSTGYGMGVFSYVVPVFVAEIAPKELRGTLTTLNQFMITAAVSVSFTIGNVFSWRVLAIIGLIPTAVLLLGLFFIPESPRWLAKRGREKDFVAALQILRGNDADISEEAEEIQDYITTLERLPKSRLLELFHRRYLRSVTIGIGLMVCQQFGGINGICFYTSSIFELAGFSPTIGTITYACLQIVITGLGAALIDKAGRKPLLLLSGSGLVAGCTFVAVAFYLKVHEVGVEAVPALAVTGILVYIGSFSIGMGAIPWVVMSEIFPVNIKGLAGSVATLVNWFGAWLCSYTFNFFMSWSSYGTFILYAAINALAILFIIVAVPETKGKSLEQLQADINS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01439 466 Gene3D MFS general substrate transporter like domains 24 465 IPR036259 -
Gma19g01439 466 Pfam Sugar (and other) transporter 41 462 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gma19g01439 466 ProSitePatterns Sugar transport proteins signature 1. 88 105 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma19g01439 466 ProSiteProfiles Major facilitator superfamily (MFS) profile. 30 453 IPR020846 GO:0022857
Gma19g01439 466 PRINTS Sugar transporter signature 125 144 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma19g01439 466 PRINTS Sugar transporter signature 277 287 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma19g01439 466 PRINTS Sugar transporter signature 366 387 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma19g01439 466 PRINTS Sugar transporter signature 389 401 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma19g01439 466 CDD MFS_GLUT6_8_Class3_like 32 459 IPR044775 GO:0008643|GO:0051119
Gma19g01439 466 SUPERFAMILY MFS general substrate transporter 28 461 IPR036259 -
Gma19g01439 466 PANTHER - 27 464 - -
Gma19g01439 466 TIGRFAM SP: MFS transporter, sugar porter (SP) family 28 459 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma19g01439 466 ProSitePatterns Sugar transport proteins signature 1. 318 335 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma19g01439 466 PANTHER SUGAR TRANSPORTER ERD6-LIKE 7 27 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01439 Gma-Chr19 43647976 43655777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01439 1 465 Organic Solute Cotransporters AT5G18840 57.829 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01439 K03444 - gmx:100819822 906.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01439 19 43647976 43655777 Gma19g02262 19 51302577 51306672 ECH
Gma19g01439 19 43647976 43655777 Gma03g02222 03 47543738 47548434 ECH
Gma19g01439 19 43647976 43655777 Gma19g01439 19 43647976 43655777 ECH
Gma03g01373 03 39893641 39898099 Gma19g01439 19 43647976 43655777 ECH
Gma19g01439 19 43647976 43655777 Gma03g01374 03 39901915 39906075 GST